DRSC/TRiP Functional Genomics Resources

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Protein Alignment Scox and sco2

DIOPT Version :9

Sequence 1:NP_608884.1 Gene:Scox / 33711 FlyBaseID:FBgn0262467 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_001038697.1 Gene:sco2 / 606683 ZFINID:ZDB-GENE-041210-173 Length:279 Species:Danio rerio


Alignment Length:222 Identity:110/222 - (49%)
Similarity:148/222 - (66%) Gaps:3/222 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AQQPAIRHYAAPADSTKGKGP-ISWRSLAVIGALGAGG-VGFMLYVKSEKDEARMKERQRQLGKA 78
            |:|.|.....:|.....|... |..|:..|:..|..|| :|...||..||::....:|..||.|.
Zfish    45 ARQRAFYSQNSPKTPNPGSSAGIKLRTRLVVTLLFGGGIIGTWWYVHQEKEKRIQMQRLEQLRKV 109

  Fly    79 AIG-GSWELVDSQGAVRKSEDFLGKWLLIYFGFTHCPDICPDELEKMAAVVDEVEKSPQTPAVQP 142
            |:| |.:.|:|..|..|...||||.|:|:|||||||||||||||||:.:||..::|.|..|:|||
Zfish   110 ALGQGDFHLLDHTGQRRTKRDFLGHWVLLYFGFTHCPDICPDELEKLTSVVHILDKDPSLPSVQP 174

  Fly   143 IFITVDPERDSKEVVAKYVKEFSPKLLGLTGTVEQIRKVCKAFRVYFSAGPRDEDNDYIVDHTII 207
            :|||||||||....:|:|||:|.|:|:||||:.|::::..:.||||.|.||:|||.||||||:|:
Zfish   175 LFITVDPERDDVSAMARYVKDFHPRLVGLTGSAEEVKQAGRDFRVYASNGPKDEDGDYIVDHSIV 239

  Fly   208 MYLVNPDGEFVDYYGQNRDKDQCVASI 234
            :|||||||.|:|||.:.::..|...||
Zfish   240 IYLVNPDGLFIDYYNRMKNDTQIAESI 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ScoxNP_608884.1 SCO1-SenC 81..217 CDD:396962 82/136 (60%)
sco2NP_001038697.1 SCO 113..254 CDD:239266 84/140 (60%)
AhpC-TSA 115..241 CDD:278975 73/125 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581891
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51910
OrthoDB 1 1.010 - - D1462537at2759
OrthoFinder 1 1.000 - - FOG0002408
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100983
Panther 1 1.100 - - O PTHR12151
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1293
SonicParanoid 1 1.000 - - X1597
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.890

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