DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3i and TIF34

DIOPT Version :10

Sequence 1:NP_523478.1 Gene:eIF3i / 33710 FlyBaseID:FBgn0015834 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_013866.1 Gene:TIF34 / 855177 SGDID:S000004754 Length:347 Species:Saccharomyces cerevisiae


Alignment Length:328 Identity:148/328 - (45%)
Similarity:211/328 - (64%) Gaps:6/328 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRPLMLQGHERSITQIKYNREGDLLFSCSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDVDWESR 65
            |:.:.|.||||.:||:|||:|||||||||||...:||||||||||||.|||.|.:|.:|||..::
Yeast     1 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTK 65

  Fly    66 KLITGAGDMTAKIWDVEYGTVIASIPTKSSVRTSNFSFSGNQAAYSTDKAMGQ--SCELFLIDVR 128
            ..:||:.|.:.|:|||..|..:|:..:...|:...||..||......|..|..  |..::.|:..
Yeast    66 YCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERD 130

  Fly   129 NADSSLSE--QEPTLRIPMTE--SKITSMLWGPLDETIITGHDNGNIAIWDIRKGQKVVDSGTDH 189
            :|...|::  :||..:|...|  ...|...|....:.||.||.:|.|:.:|:....:.|||...|
Yeast   131 SATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLH 195

  Fly   190 SAGINDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTERPVNSAAISPIMDHVVLGGGQDA 254
            ...|:|||.|.|.|.|:|:|:||.:.|.|..:|..||.|:|:.|:|:|.|:|:.:.::|||||:|
Yeast   196 EKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEA 260

  Fly   255 MEVTTTSTKAGKFDSRFFHLIYEEEFARLKGHFGPINSLAFHPDGKSYASGGEDGFVRVQTFDST 319
            .:|||||...|||::||:|.|:|||..|::|||||:|::|..|.|.||||||||||:|:..|:.:
Yeast   261 KDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKS 325

  Fly   320 YFE 322
            ||:
Yeast   326 YFD 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3iNP_523478.1 WD40 <6..313 CDD:441893 143/312 (46%)
WD40 repeat 13..50 CDD:293791 28/36 (78%)
WD40 repeat 56..91 CDD:293791 13/34 (38%)
WD40 repeat 96..142 CDD:293791 13/49 (27%)
WD40 repeat 151..186 CDD:293791 11/34 (32%)
WD40 repeat 193..228 CDD:293791 17/34 (50%)
WD40 repeat 234..284 CDD:293791 26/49 (53%)
WD40 repeat 290..313 CDD:293791 14/22 (64%)
TIF34NP_013866.1 WD40 <6..319 CDD:441893 143/312 (46%)
WD40 repeat 13..49 CDD:293791 28/35 (80%)
WD40 repeat 56..91 CDD:293791 13/34 (38%)
WD40 repeat 96..148 CDD:293791 13/51 (25%)
WD40 repeat 156..193 CDD:293791 12/36 (33%)
WD40 repeat 240..290 CDD:293791 26/49 (53%)
WD40 repeat 297..319 CDD:293791 14/21 (67%)

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