DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3i and AT1G15470

DIOPT Version :10

Sequence 1:NP_523478.1 Gene:eIF3i / 33710 FlyBaseID:FBgn0015834 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_563978.1 Gene:AT1G15470 / 838117 AraportID:AT1G15470 Length:333 Species:Arabidopsis thaliana


Alignment Length:317 Identity:93/317 - (29%)
Similarity:154/317 - (48%) Gaps:35/317 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PLMLQGHERSITQIKYN---REGDLLFSCSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDVDWES 64
            ||:..||.|.:..:.|:   .:|..|.|.|||..|.:.....|:.:||::||:||||...:|..:
plant     4 PLVCHGHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNA 68

  Fly    65 RKLITGAGDMTAKIWDVEYGTVIASIPTKSSVRTSNFSFSGNQAAYSTDKAM--GQSCELFLIDV 127
            .:..:.:.|.|||||:...|..:.|...|..||...||       ..|.:.:  |....|.:.|:
plant    69 IRAASASADFTAKIWNALTGDELHSFEHKHIVRACAFS-------EDTHRLLTGGMEKILRIFDL 126

  Fly   128 RNADSSLSEQEPTLRIPMTESKITSMLWGPLDETIITG-HDNGNIAIWDIRKGQKVVDSGTDHSA 191
            ...|:      |...:..:...|.::.|...|.||::. .|.|:|.:|||| ..|:|.: .:..:
plant   127 NRPDA------PPKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDIR-SDKIVHT-LETKS 183

  Fly   192 GINDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTERPVNSAAISPIMDHVVLGGGQDAME 256
            .:...::|:|| .::|.:..::.|.:|:::...||:|.....|.||::.|...:..:.||:| |.
plant   184 PVTSAEVSQDG-RYITTADGSSVKFWDAKNFGLLKSYDMPCNVESASLEPKHGNTFIAGGED-MW 246

  Fly   257 VTTTSTKAGKFDSRFFHLIYEEEFARLKGHFGPINSLAFHPDGKSYASGGEDGFVRV 313
            |.....:.|            ||....|||.||::.:.:.|.|:||.||.|||.||:
plant   247 VHRFDFQTG------------EEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRI 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3iNP_523478.1 WD40 <6..313 CDD:441893 90/312 (29%)
WD40 repeat 13..50 CDD:293791 11/39 (28%)
WD40 repeat 56..91 CDD:293791 10/34 (29%)
WD40 repeat 96..142 CDD:293791 10/47 (21%)
WD40 repeat 151..186 CDD:293791 13/35 (37%)
WD40 repeat 193..228 CDD:293791 8/34 (24%)
WD40 repeat 234..284 CDD:293791 12/49 (24%)
WD40 repeat 290..313 CDD:293791 10/22 (45%)
AT1G15470NP_563978.1 WD40 <8..292 CDD:441893 91/313 (29%)
WD40 repeat 15..54 CDD:293791 11/38 (29%)
WD40 repeat 101..138 CDD:293791 9/49 (18%)
WD40 repeat 143..180 CDD:293791 14/38 (37%)
WD40 repeat 186..220 CDD:293791 8/34 (24%)
WD40 repeat 225..262 CDD:293791 12/49 (24%)

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