DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3i and AT3G15610

DIOPT Version :10

Sequence 1:NP_523478.1 Gene:eIF3i / 33710 FlyBaseID:FBgn0015834 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_566519.1 Gene:AT3G15610 / 820803 AraportID:AT3G15610 Length:341 Species:Arabidopsis thaliana


Alignment Length:315 Identity:92/315 - (29%)
Similarity:154/315 - (48%) Gaps:31/315 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PLMLQGHERSITQIKYN---REGDLLFSCSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDVDWES 64
            ||:..||.|.:..:.|:   .:|..|.|.|||.:|.:.....|:.:||::||:||||...:|..:
plant     9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNA 73

  Fly    65 RKLITGAGDMTAKIWDVEYGTVIASIPTKSSVRTSNFSFSGNQAAYSTDKAMGQSCELFLIDVRN 129
            .:..:.:.|.:||:||...|.|:.|...|..||...||   ....|.......:...:|  |:..
plant    74 LRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFS---QDTKYLITGGFEKILRVF--DLNR 133

  Fly   130 ADSSLSEQEPTLRIPMTESKITSMLWGPLDETIITG-HDNGNIAIWDIRKGQKVVDSGTDHSAGI 193
            .|:      |...|..:...|.::.|...|:||::. .|.|.:.:||:|.| |:|.: .:..:.:
plant   134 LDA------PPTEIDKSPGSIRTLTWLHGDQTILSSCTDIGGVRLWDVRSG-KIVQT-LETKSPV 190

  Fly   194 NDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTERPVNSAAISPIMDHVVLGGGQDAMEVT 258
            ...::|:|| .::|.:..:|.|.:|:.....:|:|.....:.||::.|...:..:.||:| |.| 
plant   191 TSAEVSQDG-RYITTADGSTVKFWDANHFGLVKSYDMPCNIESASLEPKSGNKFVAGGED-MWV- 252

  Fly   259 TTSTKAGKFDSRFFHLIYEEEFARLKGHFGPINSLAFHPDGKSYASGGEDGFVRV 313
                       |.|.....:|....|||.||::.:.|.|.|:|||||.|||.:|:
plant   253 -----------RLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRI 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3iNP_523478.1 WD40 <6..313 CDD:441893 89/310 (29%)
WD40 repeat 13..50 CDD:293791 11/39 (28%)
WD40 repeat 56..91 CDD:293791 10/34 (29%)
WD40 repeat 96..142 CDD:293791 9/45 (20%)
WD40 repeat 151..186 CDD:293791 12/35 (34%)
WD40 repeat 193..228 CDD:293791 8/34 (24%)
WD40 repeat 234..284 CDD:293791 11/49 (22%)
WD40 repeat 290..313 CDD:293791 11/22 (50%)
AT3G15610NP_566519.1 WD40 <7..299 CDD:441893 92/315 (29%)
WD40 repeat 20..59 CDD:293791 11/38 (29%)
WD40 repeat 106..143 CDD:293791 9/47 (19%)
WD40 repeat 148..185 CDD:293791 13/38 (34%)
WD40 repeat 191..225 CDD:293791 8/34 (24%)
WD40 repeat 230..267 CDD:293791 11/49 (22%)

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