DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3i and sum1

DIOPT Version :9

Sequence 1:NP_523478.1 Gene:eIF3i / 33710 FlyBaseID:FBgn0015834 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_594958.1 Gene:sum1 / 2543537 PomBaseID:SPAC4D7.05 Length:328 Species:Schizosaccharomyces pombe


Alignment Length:324 Identity:148/324 - (45%)
Similarity:217/324 - (66%) Gaps:3/324 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRPLMLQGHERSITQIKYNREGDLLFSCSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDVDWESR 65
            |||::||||||.:||||||.:|||||||:||:..|||:|.||||||||:||.||:|..|::..|.
pombe     1 MRPIILQGHERPLTQIKYNHDGDLLFSCAKDKVINVWFSHNGERLGTYEGHTGAIWTCDINKSST 65

  Fly    66 KLITGAGDMTAKIWDVEYGTVIASIPTKSSVRTSNFSFSGNQAAYSTDKAMGQSCELFLIDVRNA 130
            .:::||.|.|.::|||:.|..:......::|:...|:....:....|::.||.:..:.:..|..:
pombe    66 LMVSGAADNTMRLWDVKTGKQLYKWEFPTAVKRVEFNEDDTRILAVTEERMGYAGTVTVFRVPIS 130

  Fly   131 DSSLSEQEPTLRIPMTESKITSMLWGPLDETIITGHDNGNIAIWDIRKGQKVVDSGTDHSAG--I 193
            :|..:.:.|...|...|||.|...|..|.:.:.|||::|:::.:|...|: .|:|...|::|  |
pombe   131 ESDAAAETPLYVITTRESKATVAGWSYLSKFLFTGHEDGSVSRYDAITGE-FVESKQVHNSGSTI 194

  Fly   194 NDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTERPVNSAAISPIMDHVVLGGGQDAMEVT 258
            .|:|...|.|.|:|:.||||||..|.:|...:|||.|:.|:|:::.:|:.|.|:|||||:|.:||
pombe   195 TDLQFYPDRTYFITSCKDTTAKAIDVDSFEVIKTYLTDTPLNTSSFTPVQDFVILGGGQEARDVT 259

  Fly   259 TTSTKAGKFDSRFFHLIYEEEFARLKGHFGPINSLAFHPDGKSYASGGEDGFVRVQTFDSTYFE 322
            ||:.:.|||::||:|.|.|||..|:||||||||::|.||.|..||||||||:|||..||..||:
pombe   260 TTAARQGKFEARFYHAILEEELGRVKGHFGPINTIAVHPKGTGYASGGEDGYVRVHFFDKNYFD 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3iNP_523478.1 WD40 6..313 CDD:295369 139/308 (45%)
WD40 <9..313 CDD:225201 136/305 (45%)
WD40 repeat 13..50 CDD:293791 27/36 (75%)
WD40 repeat 56..91 CDD:293791 11/34 (32%)
WD40 repeat 96..142 CDD:293791 8/45 (18%)
WD40 repeat 151..186 CDD:293791 10/34 (29%)
WD40 repeat 193..228 CDD:293791 16/34 (47%)
WD40 repeat 234..284 CDD:293791 25/49 (51%)
WD40 repeat 290..313 CDD:293791 15/22 (68%)
sum1NP_594958.1 WD40 <4..314 CDD:225201 139/310 (45%)
WD40 6..314 CDD:295369 139/308 (45%)
WD40 repeat 13..49 CDD:293791 26/35 (74%)
WD40 repeat 56..91 CDD:293791 11/34 (32%)
WD40 repeat 96..144 CDD:293791 8/47 (17%)
WD40 repeat 152..189 CDD:293791 10/37 (27%)
WD40 repeat 194..216 CDD:293791 11/21 (52%)
WD40 repeat 236..271 CDD:293791 17/34 (50%)
WD40 repeat 291..328 CDD:293791 21/33 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 72 1.000 Domainoid score I2610
eggNOG 1 0.900 - - E1_KOG0643
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2786
Inparanoid 1 1.050 308 1.000 Inparanoid score I584
OMA 1 1.010 - - QHG53673
OrthoFinder 1 1.000 - - FOG0003155
OrthoInspector 1 1.000 - - oto100459
orthoMCL 1 0.900 - - OOG6_101932
Panther 1 1.100 - - LDO PTHR19877
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R384
SonicParanoid 1 1.000 - - X3042
TreeFam 1 0.960 - -
1413.860

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