DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3i and Strap

DIOPT Version :10

Sequence 1:NP_523478.1 Gene:eIF3i / 33710 FlyBaseID:FBgn0015834 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_035629.2 Gene:Strap / 20901 MGIID:1329037 Length:350 Species:Mus musculus


Alignment Length:322 Identity:96/322 - (29%)
Similarity:150/322 - (46%) Gaps:48/322 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PLMLQGHERSITQIKYN---REGDLLFSCSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDVDWES 64
            ||...||.|.:..:.::   ..|..|.|..||.||.:.....|:.:||:.||:||||...::.::
Mouse     7 PLTCSGHTRPVVDLAFSGITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDA 71

  Fly    65 RKLITGAGDMTAKIWDVEYGTVIASIPTKSSVRT------SNFSFSGNQAAYSTDKAMGQSCELF 123
            .|..|.|.|.|||:||...|..:.::..|..|:|      ||:..:|.|     ||.:       
Mouse    72 TKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDSNYLLTGGQ-----DKLL------- 124

  Fly   124 LIDVRNADSSLSEQEPTLRIPMTESKITSMLWGPLDETIITGHDNGNIAIWDIRKGQKVVDSGTD 188
                |..|.:..|.||. .|....|.|...||...|:.|::. |:..:.:||.....:|  ...:
Mouse   125 ----RIYDLNKPEAEPK-EISGHTSGIKKALWCSDDKQILSA-DDKTVRLWDHATMTEV--KSLN 181

  Fly   189 HSAGINDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTERPVNSAAISPIMDHVVLGGGQD 253
            .:..::.|:...:|.:.|.....:.| ...:.||..:|:::....:|||::.|..:.:| .||:|
Mouse   182 FNMSVSSMEYIPEGEILVITYGRSIA-FHSAVSLEPIKSFEAPATINSASLHPEKEFLV-AGGED 244

  Fly   254 AMEVTTTSTKAGKFDSRFFHLIYE--EEFARLKGHFGPINSLAFHPDGKSYASGGEDGFVRV 313
                    .|..|:|       |.  ||....|||||||:.:.|.|||:.||||.|||.:|:
Mouse   245 --------FKLYKYD-------YNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRL 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3iNP_523478.1 WD40 <6..313 CDD:441893 93/317 (29%)
WD40 repeat 13..50 CDD:293791 10/39 (26%)
WD40 repeat 56..91 CDD:293791 11/34 (32%)
WD40 repeat 96..142 CDD:293791 13/51 (25%)
WD40 repeat 151..186 CDD:293791 8/34 (24%)
WD40 repeat 193..228 CDD:293791 7/34 (21%)
WD40 repeat 234..284 CDD:293791 14/51 (27%)
WD40 repeat 290..313 CDD:293791 12/22 (55%)
StrapNP_035629.2 WD40 <4..294 CDD:441893 96/322 (30%)
WD 1 12..56 13/43 (30%)
WD 2 57..96 16/38 (42%)
WD 3 98..137 13/54 (24%)
WD40 repeat 104..141 CDD:293791 13/53 (25%)
WD 4 141..179 10/40 (25%)
WD40 repeat 146..181 CDD:293791 9/37 (24%)
WD 5 180..212 4/32 (13%)
WD40 repeat 187..221 CDD:293791 7/34 (21%)
WD 6 221..262 14/56 (25%)
WD40 repeat 226..262 CDD:293791 14/51 (27%)
WD 7 263..302 18/29 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 326..350
Blue background indicates that the domain is not in the aligned region.

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