DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3i and eif-3.I

DIOPT Version :10

Sequence 1:NP_523478.1 Gene:eIF3i / 33710 FlyBaseID:FBgn0015834 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_490988.2 Gene:eif-3.I / 171809 WormBaseID:WBGene00001232 Length:327 Species:Caenorhabditis elegans


Alignment Length:322 Identity:148/322 - (45%)
Similarity:220/322 - (68%) Gaps:4/322 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRPLMLQGHERSITQIKYNREGDLLFSCSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDVDWESR 65
            ||||.|:||||::|::::||||||.|||:||:||.|||:.||||:|:||||.||||.:||.|::.
 Worm     1 MRPLSLKGHERALTRVRFNREGDLTFSCAKDKKPCVWYTENGERIGSYDGHNGAVWDIDVSWDTT 65

  Fly    66 KLITGAGDMTAKIWDVEYGTVIASIPTKSSVRTSNFSFSGNQAAYSTDKAMGQSCELFLI-DVRN 129
            |.:|.:||:|.||||.|.|..:.:|..::.:::..||:|||...::|.| |.::...|.: |:|:
 Worm    66 KCVTASGDLTVKIWDAELGNCLYTINHQTPMKSCGFSYSGNLVCFTTQK-MTKNLSTFQVRDLRD 129

  Fly   130 ADSSLSEQEPTLRIPMTESKITSMLWGPLDETIITGHDNGNIAIWDIRKGQKVVDSGTD-HSAGI 193
            : |.:.|...:......:...|:.|:..:|:.:..|.::|.:..:|:|.....:.:... |...:
 Worm   130 S-SQMVEGGESFFYSQFDVNATTALFTQMDDLVTIGFESGLLQQYDLRNPDTPIHTNESVHRYSV 193

  Fly   194 NDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTERPVNSAAISPIMDHVVLGGGQDAMEVT 258
            .|:|||..|...::||:|.||.|.|...|..||.||:|||||||.|||..||:.||||:|||:||
 Worm   194 QDLQLSPRGDFLISASRDKTAALLDVNDLKKLKQYKSERPVNSACISPNRDHICLGGGEDAMQVT 258

  Fly   259 TTSTKAGKFDSRFFHLIYEEEFARLKGHFGPINSLAFHPDGKSYASGGEDGFVRVQTFDSTY 320
            .||..||.|:::.:|:::||||||.||||||||::|:||.|...|:|||||::|:|.||..|
 Worm   259 QTSVSAGHFEAKIYHMVFEEEFARFKGHFGPINTMAWHPSGTIIATGGEDGYIRIQEFDEDY 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3iNP_523478.1 WD40 <6..313 CDD:441893 139/308 (45%)
WD40 repeat 13..50 CDD:293791 23/36 (64%)
WD40 repeat 56..91 CDD:293791 15/34 (44%)
WD40 repeat 96..142 CDD:293791 13/46 (28%)
WD40 repeat 151..186 CDD:293791 7/34 (21%)
WD40 repeat 193..228 CDD:293791 15/34 (44%)
WD40 repeat 234..284 CDD:293791 30/49 (61%)
WD40 repeat 290..313 CDD:293791 12/22 (55%)
eif-3.INP_490988.2 WD40 6..313 CDD:475233 139/308 (45%)
WD40 repeat 14..50 CDD:293791 23/35 (66%)
WD40 repeat 55..91 CDD:293791 16/35 (46%)
WD40 repeat 97..186 CDD:293791 20/90 (22%)
WD40 repeat 193..226 CDD:293791 13/32 (41%)
WD40 repeat 234..284 CDD:293791 30/49 (61%)
WD40 repeat 290..313 CDD:293791 12/22 (55%)

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