DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3i and wmd

DIOPT Version :10

Sequence 1:NP_523478.1 Gene:eIF3i / 33710 FlyBaseID:FBgn0015834 Length:326 Species:Drosophila melanogaster
Sequence 2:XP_313892.5 Gene:wmd / 1274869 VectorBaseID:AGAMI1_005476 Length:368 Species:Anopheles gambiae


Alignment Length:329 Identity:96/329 - (29%)
Similarity:158/329 - (48%) Gaps:45/329 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PLMLQGHERSITQIKYN---REGDLLFSCSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDVDWES 64
            ||...||.|.:..:.::   ..|..|.|..||.||.:.....|:.:||::||:||||.:.::..:
Mosquito     5 PLTCSGHTRPVVHLDFSGLTECGYFLISACKDGKPMLRMGDTGDWVGTFEGHKGAVWGVALNESA 69

  Fly    65 RKLITGAGDMTAKIWDVEYGTVIASIPTKSSVRTSNFSFSGNQAAYSTDKAMGQSCELFLIDVRN 129
            ....:||.|.|.|||:...|..:.|:.....|:|..||.........:::.:     :.:.|:.:
Mosquito    70 TLAASGAADFTGKIWNAVTGEEVHSLQHNHIVKTVAFSHDSQYLVTGSNEKL-----VRVFDLNS 129

  Fly   130 ADSSLSEQEPTLRIPMTES------KITSMLWGPLDETIITGHDNGNIAIWDIRKGQKVVDSGTD 188
            ...:|            ||      .:...|:...::.:|:..|:.::.:||...||:|  |..:
Mosquito   130 EGKAL------------ESYAGHAGAVKRALFCRNEKCVISCADDKSMRLWDRGTGQEV--SRVE 180

  Fly   189 HSAGINDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTERPVNSAAISPIMDHVVLGGGQD 253
            .|:..|.::|||||::......:.|| .:|.|:|..||.......|:||::.| ..|:.:.||:|
Mosquito   181 FSSHPNGLELSKDGSILTVTYGNCTA-FYDMETLTQLKEITIPTRVSSASLHP-DKHIFVCGGED 243

  Fly   254 AMEVTTTSTKAGKFDSRFFHLIYEEEFARLKGHFGPINSLAFHPDGKSYASGGEDGFVRV--QTF 316
                    .|..|:|     .|...|....||||||::|::|.|||:.||||.|||.:|:  .|.
Mosquito   244 --------FKMYKYD-----YITGNEIESFKGHFGPVHSVSFSPDGELYASGSEDGTLRLWQTTV 295

  Fly   317 DSTY 320
            ..||
Mosquito   296 GKTY 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3iNP_523478.1 WD40 <6..313 CDD:441893 90/315 (29%)
WD40 repeat 13..50 CDD:293791 10/39 (26%)
WD40 repeat 56..91 CDD:293791 10/34 (29%)
WD40 repeat 96..142 CDD:293791 6/45 (13%)
WD40 repeat 151..186 CDD:293791 8/34 (24%)
WD40 repeat 193..228 CDD:293791 13/34 (38%)
WD40 repeat 234..284 CDD:293791 13/49 (27%)
WD40 repeat 290..313 CDD:293791 12/22 (55%)
wmdXP_313892.5 None

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