DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Marcal1 and CHD1L

DIOPT Version :10

Sequence 1:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_004275.4 Gene:CHD1L / 9557 HGNCID:1916 Length:897 Species:Homo sapiens


Alignment Length:592 Identity:146/592 - (24%)
Similarity:240/592 - (40%) Gaps:129/592 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 LMPFQQDGVCFAIAQK----GRIMICDEMGLGKTYQALAVADY----FKDDWPLLVCTTASTRDS 303
            |..:|.:||.: :||:    ...::.||||||||.|.:|:..|    ..|:.|.|:....|...:
Human    46 LRSYQLEGVNW-LAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLSVLSN 109

  Fly   304 WAKHIMDLLPKVPIHYVQVLNNNQLYVGEAK----------------VLITSYNMMERHEDKLMQ 352
            |.:.:....|.:         :...|.|:.:                ||:|:|.:..:....|..
Human   110 WKEEMQRFAPGL---------SCVTYAGDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKS 165

  Fly   353 RKFGFIIFDESHTLKNSKAKCTTTAKRLTDQAKRVV---LLSGTPALSRPLELFTQLQMIDGKFM 414
            ..:..::.||:|.|||..:....|....:     ||   ||:|||..:...||::.|..::....
Human   166 FPWSVLVVDEAHRLKNQSSLLHKTLSEFS-----VVFSLLLTGTPIQNSLQELYSLLSFVEPDLF 225

  Fly   415 NFME---FTTRYCDGKQSTFGWDANGQSNLEELKVILHLKYMLRRTKVEVLPQLAEKNRETVVLD 476
            :..|   |..||.|.::.:        .:..||..:|. .::|||.|.||..:|.:|. |.|:..
Human   226 SKEEVGDFIQRYQDIEKES--------ESASELHKLLQ-PFLLRRVKAEVATELPKKT-EVVIYH 280

  Fly   477 --PAL--VWTNAETKETLDAFNKELKTAKGRATEEILLRF----------------------YAR 515
              .||  .:..|...:.||||..|  |||....:.||.:.                      :..
Human   281 GMSALQKKYYKAILMKDLDAFENE--TAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLT 343

  Fly   516 TAEVKTRAVCAYLKTLVKEQKKFIIFAHHRVMMDAISDFLSGLKVHYIRIDGQTRSDHRSDSVDT 580
            .|..|...:...|..|.....:.::|:....|:|.:.|::......|.|:||..|.:.|..::..
Human   344 EASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKN 408

  Fly   581 FQKKSSCKVALLSLKACNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVICRYLIAH 645
            |.:: ...|.|||.:|...|:.||||:.::|.:.|:||....||.:|||||||.|.|....||..
Human   409 FGQQ-PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGR 472

  Fly   646 NTADDIIWNMLKNKQEVLSKV---GIFAENLQKATHTA----APTSSHKIEEYFSPSTSTSLEPE 703
            :|.::|::....:|.::.:.:   |.|....||....|    :......:::..:...||..|.:
Human   473 DTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTMDEID 537

  Fly   704 RNSI------KQYFS-TIPA------------------------KEPP-------EQNNNTEMTK 730
            ..||      .|:.| .:||                        |||.       ||..|.:.|.
Human   538 LESILGETKDGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNLQKTL 602

  Fly   731 VNKAESD 737
            :.||..:
Human   603 LEKASQE 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Marcal1NP_608883.1 HARP 160..216 CDD:462166
HepA <233..666 CDD:440319 123/474 (26%)
DEXHc_HARP_SMARCAL1 247..456 CDD:350768 56/238 (24%)
CHD1LNP_004275.4 PLN03142 46..699 CDD:215601 146/592 (25%)
DEAH box 174..177 2/2 (100%)
Regulatory linker segment (RLS). /evidence=ECO:0000269|PubMed:33357431 601..635 3/9 (33%)
Required for ATPase activity. /evidence=ECO:0000269|PubMed:29220653 615..673
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 628..654
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 687..711
Macro_Poa1p-like_SNF2 716..866 CDD:394880
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.