DRSC/TRiP Functional Genomics Resources

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Protein Alignment Marcal1 and Smarca5

DIOPT Version :10

Sequence 1:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_444354.2 Gene:Smarca5 / 93762 MGIID:1935129 Length:1051 Species:Mus musculus


Alignment Length:825 Identity:191/825 - (23%)
Similarity:309/825 - (37%) Gaps:199/825 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PATNGKSTTSATGATQHANNGKSNPN---QPQA-----KSPLN------FYRSPTGEQKKINRSG 82
            |..:..|..||.||...::..|..|.   .|.|     ..|.:      |.....|:||:|....
Mouse    12 PPESAPSKPSAAGAGGSSSGNKGGPEGGAAPAAPCAAGSGPADTEMEEVFDHGSPGKQKEIQEPD 76

  Fly    83 PTPGDNKSSSFLNALK-AIKQTSNRELSRGAAHPYQRPNGGNERNKPTLSLSSDKEKPVAVLLGN 146
            ||..:...:...|..: .:|||   ||   .|| :.:|..   :..||..|   |.||....:..
Mouse    77 PTYEEKMQTDRANRFEYLLKQT---EL---FAH-FIQPAA---QKTPTSPL---KMKPGRPRVKK 128

  Fly   147 SITCNLYLISTHRFAAQTSGYHEQLVTVFK---NMPTKCYDGQTRIWSFDLSDYQSLKTHAADLK 208
            ....||..:..:|.........|:|:|...   |:.|:..|..:.:....|.|||          
Mouse   129 DEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQ---------- 183

  Fly   209 PYVHMNGIPKKVLDLCGQPPVVPERSVLASIEPKLADQLMPFQQDGVCFAIAQKGRIMICDEMGL 273
                :.|:                            :.|:...::|:      .|  ::.|||||
Mouse   184 ----VRGL----------------------------NWLISLYENGI------NG--ILADEMGL 208

  Fly   274 GKTYQALAVADYFKD----DWPLLVCTTASTRDSWAKHIMDLLPKVPIHYVQVLNNNQ------- 327
            |||.|.:::..|.|.    ..|.:|....||..:|.......:|  .:..|.::.:.:       
Mouse   209 GKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKKWVP--TLRSVCLIGDKEQRAAFVR 271

  Fly   328 --LYVGEAKVLITSYNMMERHEDKLMQRKFGFIIFDESHTLKNSKAKCTTTAKRLTDQAKRVVLL 390
              |..||..|.:|||.|:.:.:....:..:.:::.||:|.:||.|:|.:...:..  :....:||
Mouse   272 DVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF--KTTNRLLL 334

  Fly   391 SGTPALSRPLELFTQLQMIDGKFMNFME-----FTTRYCDGKQSTFGWDANGQSNLEELKVILHL 450
            :|||..:...||::.|..:.....|..:     |.|..|.|.|..          :|.|.::|. 
Mouse   335 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKL----------VERLHMVLR- 388

  Fly   451 KYMLRRTKVEVLPQLAEKNRETVVLDPALV---WTNAETKETLDAFNKELKTAKGRATEEILLRF 512
            .::|||.|.:|...|..|....:.:..:.:   |......:.:|..|...|..|.|.. .||::.
Mouse   389 PFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQL 452

  Fly   513 ------------------YARTAEVKTRA----VCAYLKTLVKEQ-KKFIIFAHHRVMMDAISDF 554
                              |.....:.|.:    |...|...:||| .:.:||:....::|.:.|:
Mouse   453 RKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDY 517

  Fly   555 LSGLKVHYIRIDGQTRSDHRSDSVDTFQKKSSCK-VALLSLKACNSGITLTAAEIIVFAELDWNP 618
            .......|.|:||||..|.|.||::.:.:.:|.| |.:||.:|...||.|..|::::..:.||||
Mouse   518 CMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNP 582

  Fly   619 STLAQAESRAHRIGQTKPVICRYLIAHNTADDIIWNMLKNKQE----VLSKVGIFAENLQK---- 675
            ....||..|||||||||.|.....|..||.::.|....:.|..    |:.:..:..:||.|    
Mouse   583 QVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKD 647

  Fly   676 ---------ATHTAAPTSSHKIEE-----------------------------YFSPSTSTSL-- 700
                     |||..|...|...:|                             .|:..|.:|:  
Mouse   648 EMLQMIRHGATHVFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYN 712

  Fly   701 -EPERNSIKQYFSTIPAKEPPEQNNNTEMTKVNKAESDIAAFFND 744
             |.|....||..:.....|||::.        .||...:.|:|.:
Mouse   713 FEGEDYREKQKIAFTEWIEPPKRE--------RKANYAVDAYFRE 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Marcal1NP_608883.1 HARP 160..216 CDD:462166 10/58 (17%)
HepA <233..666 CDD:440319 121/481 (25%)
DEXHc_HARP_SMARCAL1 247..456 CDD:350768 54/226 (24%)
Smarca5NP_444354.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..81 18/68 (26%)
PLN03142 68..1011 CDD:215601 178/769 (23%)
DEAH box 307..310 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1014..1051
Blue background indicates that the domain is not in the aligned region.

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