DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Marcal1 and STH1

DIOPT Version :10

Sequence 1:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_012140.1 Gene:STH1 / 854680 SGDID:S000001388 Length:1359 Species:Saccharomyces cerevisiae


Alignment Length:882 Identity:196/882 - (22%)
Similarity:324/882 - (36%) Gaps:203/882 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTCSSSEIAEKKRIALAKLQAKKSQLLASAPATNGKST------TSATGATQHANNGKSNPNQP 59
            |.|.....:.|.|.:.|...|....|.|.:..|:.....      :..|.|.|.:...:|....|
Yeast   234 MDTFKIKALVELKSLKLLTKQKSIRQKLINNVASQAHHNIPYLRDSPFTAAAQRSVQIRSKVIVP 298

  Fly    60 Q-AKSPLNFYRSPTGEQKKINRSGPTPGDNKSSSFLNALKAIKQTSNRELSR----------GAA 113
            | .:......|....|::|..|:......|....|      ||:..:.:.||          ||:
Yeast   299 QTVRLAEELERQQLLEKRKKERNLHLQKINSIIDF------IKERQSEQWSRQERCFQFGRLGAS 357

  Fly   114 HPYQRPNGGNERNKPT-----LSLSSDKEKPVAVLLGNS----ITCNLYLISTHRFAAQTSGYHE 169
            ...|......:|.:.|     .:|.|:.|:....||..:    ||         :...||:.:.:
Yeast   358 LHNQMEKDEQKRIERTAKQRLAALKSNDEEAYLKLLDQTKDTRIT---------QLLRQTNSFLD 413

  Fly   170 QL---VTVFKNMPTKCYDGQTRIWSFDLSDYQSLKTHAADLKPYVHMNGIPKKVLDLCGQPPVVP 231
            .|   |...:| ..|...|:         :.|.:.....:...|..:....|:.:|  .||.:: 
Yeast   414 SLSEAVRAQQN-EAKILHGE---------EVQPITDEEREKTDYYEVAHRIKEKID--KQPSIL- 465

  Fly   232 ERSVLASIEPKLADQLMPFQQDGVCFAIAQKGRIM---ICDEMGLGKTYQALAVADYF----KDD 289
                       :...|..:|..|:.:.::.....:   :.||||||||.|::::..|.    ||.
Yeast   466 -----------VGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYEVKKDI 519

  Fly   290 WPLLVCTTASTRDSWAKHIMDLLPKV-PIHYVQVLN-----NNQLYVGEAKVLITSYNMMERHED 348
            .|.||....||..:|........|.: .|.|....|     .:|:.||...||:|:|..:.:.:.
Yeast   520 GPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQHQIRVGNFDVLLTTYEYIIKDKS 584

  Fly   349 KLMQRKFGFIIFDESHTLKNSKAKCTTTAKRLTDQAKRVVLLSGTPALSRPLELFTQLQMIDGKF 413
            .|.:..:..:|.||.|.:||:::|.:.|.........|:: |:|||..:...||:..|..:..|.
Yeast   585 LLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLI-LTGTPLQNNLPELWALLNFVLPKI 648

  Fly   414 MNFME-----FTTRYCD-GKQSTFGWDANGQSNLEELKVILHLK--------YMLRRTKVEVLPQ 464
            .|..:     |.|.:.: |.|.        :..|.|.:.:|.::        ::|||.|.||...
Yeast   649 FNSAKTFEDWFNTPFANTGTQE--------KLELTEEETLLIIRRLHKVLRPFLLRRLKKEVEKD 705

  Fly   465 LAEKNRETV---------------VLDPAL---VWTNAETKETLDAFNKELKTAK---------- 501
            |.:|..:.:               :...||   ..|...||..:...|.::...:          
Yeast   706 LPDKVEKVIKCKLSGLQQQLYQQMLKHNALFVGAGTEGATKGGIKGLNNKIMQLRKICNHPFVFD 770

  Fly   502 --------GRATEEILLRFYARTAEVKTRAVCAYLKTLVKEQKKFIIFAHHRVM-------MDAI 551
                    .|...::|.|            |....:.|.:...||....|..:|       ||.:
Yeast   771 EVEGVVNPSRGNSDLLFR------------VAGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIM 823

  Fly   552 SDFLSGLKVHYIRIDGQTRSDHRSDSVDTFQKKSS---CKVALLSLKACNSGITLTAAEIIVFAE 613
            .|||....:.|:|:||.|:::.|::.::.|....|   |  .|||.:|...|:.|..|:.::..:
Yeast   824 EDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFC--FLLSTRAGGLGLNLQTADTVIIFD 886

  Fly   614 LDWNPSTLAQAESRAHRIGQTKPVICRYLIAHNTADDIIWNMLKNKQEVLSKV---GIF-----A 670
            .||||....||:.|||||||...|....||..::.:::|......|.::..||   |.|     |
Yeast   887 TDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTA 951

  Fly   671 EN--------LQKATH----------------TAAPTSSHKIEEYFSPSTSTSLEPERNSIKQYF 711
            |.        ::..|:                |.|.::..||  .|.......:..||...|...
Yeast   952 EEQEAFLRRLIESETNRDDDDKAELDDDELNDTLARSADEKI--LFDKIDKERMNQERADAKAQG 1014

  Fly   712 STIPAKEPPEQNNNTEMTKVNKAESDIAAFFNDDDDE 748
            ..:|   ||......|:.||.:  .||...|..:|.|
Yeast  1015 LRVP---PPRLIQLDELPKVFR--EDIEEHFKKEDSE 1046

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Marcal1NP_608883.1 HARP 160..216 CDD:462166 9/58 (16%)
HepA <233..666 CDD:440319 120/505 (24%)
DEXHc_HARP_SMARCAL1 247..456 CDD:350768 59/235 (25%)
STH1NP_012140.1 HSA 312..378 CDD:462194 14/71 (20%)
PLN03142 370..>955 CDD:215601 147/640 (23%)
SnAC 1006..1069 CDD:464219 14/46 (30%)
COG5076 <1211..>1359 CDD:227408
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.