DRSC/TRiP Functional Genomics Resources

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Protein Alignment Marcal1 and SNF2

DIOPT Version :10

Sequence 1:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_014933.3 Gene:SNF2 / 854465 SGDID:S000005816 Length:1703 Species:Saccharomyces cerevisiae


Alignment Length:793 Identity:181/793 - (22%)
Similarity:299/793 - (37%) Gaps:144/793 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KRIALAKLQAKKSQLLASAPATNGKSTTSATGATQHANNGKSNPNQPQAKSPLNFYRSPTGEQKK 77
            |...|.||:.||::.:|...:.| ||..:.....|...|.:.........:..|..|.   |||:
Yeast   587 KNHELLKLERKKTEAVARLKSMN-KSAINQYNRRQDKKNKRLKFGHRLIATHTNLERD---EQKR 647

  Fly    78 INRSGPTPGDNKSSSFLNALKAIKQTSNRELSRGAAHPYQRPNGGNERNKPTLSLSSDKEKPVAV 142
                    .:.|:...|.||||                       |:.......|...|:..:..
Yeast   648 --------AEKKAKERLQALKA-----------------------NDEEAYIKLLDQTKDTRITH 681

  Fly   143 LLGNSITCNLYLISTHRFAAQTSGYHEQLVTVFKNMPTKCYDGQTRIWSFDLSDYQSLKTHA--- 204
            ||..:   |.:|.|..|.......|.::::.......::..|        |||....:|...   
Yeast   682 LLRQT---NAFLDSLTRAVKDQQKYTKEMIDSHIKEASEEVD--------DLSMVPKMKDEEYDD 735

  Fly   205 ADLKPYVHMNGIPKKVL-DLCGQPPVVPERSVLASIEPKLADQLMPFQQDGVCFAIAQKGRIM-- 266
            .|....|....:..::. |:..||.::            :...|..:|..|:.:.::.....:  
Yeast   736 DDDNSNVDYYNVAHRIKEDIKKQPSIL------------VGGTLKDYQIKGLQWMVSLFNNHLNG 788

  Fly   267 -ICDEMGLGKTYQALAVADYFKD----DWPLLVCTTASTRDSWAKHIMDLLPKV-PIHYVQVLNN 325
             :.||||||||.|.:::..|..:    ..|.||....||..:|:.......|.: .|.:....|.
Yeast   789 ILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNE 853

  Fly   326 N-----QLYVGEAKVLITSYNMMERHEDKLMQRKFGFIIFDESHTLKNSKAKCTTTAKRLTDQAK 385
            .     ::..||..|::|::..:.:....|.:.|:..:|.||.|.:||:::|.:.|.........
Yeast   854 RKAKQAKIRAGEFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADY 918

  Fly   386 RVVLLSGTPALSRPLELFTQLQMIDGKFMNFME-----FTTRYCDGKQSTFGWDANGQSNLEELK 445
            |:: |:|||..:...||:..|..:..|..|.::     |.|.:.    :|.|.|....|..|.|.
Yeast   919 RLI-LTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFA----NTGGQDKIELSEEETLL 978

  Fly   446 VILHL-----KYMLRRTKVEVLPQLAEKNRETVVLDPALVW-----------------TNAETKE 488
            ||..|     .::|||.|.:|..:|.:|..:.|....:.:.                 .|.:...
Yeast   979 VIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLKYRRLFIGDQNNKKMV 1043

  Fly   489 TLDAFNKELKTAK------------------GRATEEILLRFYARTAEVKTRAVCAYLKTLVKEQ 535
            .|..||.::...|                  .|.|.:.:.| .|...|:..|    .|..|....
Yeast  1044 GLRGFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDDIWR-VAGKFELLDR----ILPKLKATG 1103

  Fly   536 KKFIIFAHHRVMMDAISDFLSGLKVHYIRIDGQTRSDHRSDSVDTFQKKSS---CKVALLSLKAC 597
            .:.:||.....:||.:.|||..:.:.|:|:||.|:||.||:.:..|....|   |  .:||.:|.
Yeast  1104 HRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLC--FILSTRAG 1166

  Fly   598 NSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVICRYLIAHNTADDIIWNMLKNKQEV 662
            ..|:.|..|:.::..:.||||....||:.|||||||...|....||..|:.:::|......|.::
Yeast  1167 GLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDI 1231

  Fly   663 LSKV---GIFAENLQKATHTAAPTSSHKIEEYFSPSTSTSLEPERNSIKQYFSTIPAKEPPEQNN 724
            ..||   |.|..........|...|....||.......:.:|.|........:.|.|:      |
Yeast  1232 DGKVIQAGKFDNKSTSEEQEALLRSLLDAEEERRKKRESGVEEEEELKDSEINEILAR------N 1290

  Fly   725 NTEMTKVNKAESD 737
            :.||..:.:.:.|
Yeast  1291 DEEMAVLTRMDED 1303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Marcal1NP_608883.1 HARP 160..216 CDD:462166 8/58 (14%)
HepA <233..666 CDD:440319 122/493 (25%)
DEXHc_HARP_SMARCAL1 247..456 CDD:350768 58/231 (25%)
SNF2NP_014933.3 QLQ 248..281 CDD:462622
HSA <617..656 CDD:462194 8/49 (16%)
PLN03142 650..>1297 CDD:215601 163/710 (23%)
SnAC 1303..1369 CDD:464219 1/1 (100%)
Bromo_SNF2 1550..1652 CDD:99950
Blue background indicates that the domain is not in the aligned region.

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