DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Marcal1 and SMARCA5

DIOPT Version :10

Sequence 1:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_003592.3 Gene:SMARCA5 / 8467 HGNCID:11101 Length:1052 Species:Homo sapiens


Alignment Length:825 Identity:191/825 - (23%)
Similarity:311/825 - (37%) Gaps:199/825 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SAPATNGKSTTSATGATQHANNGKSNPNQPQA------KSPLN------FYRSPTGEQKKINRSG 82
            |||:....|.  |:|.:..:|.|.......||      ..|.:      |..:..|:||:|....
Human    15 SAPSKPAASI--ASGGSNSSNKGGPEGVAAQAVASAASAGPADAEMEEIFDDASPGKQKEIQEPD 77

  Fly    83 PTPGDNKSSSFLNALK-AIKQTSNRELSRGAAHPYQRPNGGNERNKPTLSLSSDKEKPVAVLLGN 146
            ||..:...:...|..: .:|||   ||   .|| :.:|..   :..||..|   |.||....:..
Human    78 PTYEEKMQTDRANRFEYLLKQT---EL---FAH-FIQPAA---QKTPTSPL---KMKPGRPRIKK 129

  Fly   147 SITCNLYLISTHRFAAQTSGYHEQLVTVFK---NMPTKCYDGQTRIWSFDLSDYQSLKTHAADLK 208
            ....||..:..:|.........|:|:|...   |:.|:..|..:.:....|.|||          
Human   130 DEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQ---------- 184

  Fly   209 PYVHMNGIPKKVLDLCGQPPVVPERSVLASIEPKLADQLMPFQQDGVCFAIAQKGRIMICDEMGL 273
                :.|:                            :.|:...::|:      .|  ::.|||||
Human   185 ----VRGL----------------------------NWLISLYENGI------NG--ILADEMGL 209

  Fly   274 GKTYQALAVADYFKD----DWPLLVCTTASTRDSWAKHIMDLLPKVPIHYVQVLNNNQ------- 327
            |||.|.:::..|.|.    ..|.:|....||..:|.......:|  .:..|.::.:.:       
Human   210 GKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVP--TLRSVCLIGDKEQRAAFVR 272

  Fly   328 --LYVGEAKVLITSYNMMERHEDKLMQRKFGFIIFDESHTLKNSKAKCTTTAKRLTDQAKRVVLL 390
              |..||..|.:|||.|:.:.:....:..:.:::.||:|.:||.|:|.:...:..  :....:||
Human   273 DVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREF--KTTNRLLL 335

  Fly   391 SGTPALSRPLELFTQLQMIDGKFMNFME-----FTTRYCDGKQSTFGWDANGQSNLEELKVILHL 450
            :|||..:...||::.|..:.....|..:     |.|..|.|.|..          :|.|.::|. 
Human   336 TGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKL----------VERLHMVLR- 389

  Fly   451 KYMLRRTKVEVLPQLAEKNRETVVLDPALV---WTNAETKETLDAFNKELKTAKGRATEEILLRF 512
            .::|||.|.:|...|..|....:.:..:.:   |......:.:|..|...|..|.|.. .||::.
Human   390 PFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLL-NILMQL 453

  Fly   513 ------------------YARTAEVKTRA----VCAYLKTLVKEQ-KKFIIFAHHRVMMDAISDF 554
                              |.....:.|.:    |...|...:||| .:.:||:....::|.:.|:
Human   454 RKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDY 518

  Fly   555 LSGLKVHYIRIDGQTRSDHRSDSVDTFQKKSSCK-VALLSLKACNSGITLTAAEIIVFAELDWNP 618
            .......|.|:||||..|.|.||::.:.:.:|.| |.:||.:|...||.|..|::::..:.||||
Human   519 CMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNP 583

  Fly   619 STLAQAESRAHRIGQTKPVICRYLIAHNTADDIIWNMLKNKQE----VLSKVGIFAENLQK---- 675
            ....||..|||||||||.|.....|..||.::.|....:.|..    |:.:..:..:||.|    
Human   584 QVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKD 648

  Fly   676 ---------ATHTAAPTSSHKIEE-----------------------------YFSPSTSTSL-- 700
                     |||..|...|...:|                             .|:..|.:|:  
Human   649 EMLQMIRHGATHVFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYN 713

  Fly   701 -EPERNSIKQYFSTIPAKEPPEQNNNTEMTKVNKAESDIAAFFND 744
             |.|....||..:.....|||::.        .||...:.|:|.:
Human   714 FEGEDYREKQKIAFTEWIEPPKRE--------RKANYAVDAYFRE 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Marcal1NP_608883.1 HARP 160..216 CDD:462166 10/58 (17%)
HepA <233..666 CDD:440319 121/481 (25%)
DEXHc_HARP_SMARCAL1 247..456 CDD:350768 54/226 (24%)
SMARCA5NP_003592.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..83 18/69 (26%)
PLN03142 69..1012 CDD:215601 178/769 (23%)
DEAH box 308..311 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1015..1052
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.