DRSC/TRiP Functional Genomics Resources

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Protein Alignment Marcal1 and CHD6

DIOPT Version :10

Sequence 1:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster
Sequence 2:XP_016883588.1 Gene:CHD6 / 84181 HGNCID:19057 Length:2716 Species:Homo sapiens


Alignment Length:642 Identity:158/642 - (24%)
Similarity:254/642 - (39%) Gaps:146/642 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 SIEPKLADQLMPFQQDG---VCFAIAQKGRIMICDEMGLGKTYQALA-VADYFKD--DWPLLVCT 296
            |.|.|.::||..:|.:|   :.|....:...::.||||||||.|::. :::.|..  ..|.|:..
Human   453 SREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIA 517

  Fly   297 TASTRDSWAKHIMDLLPKVPIHY------VQVLNNNQLYVGEAK-----------VLITSYNMME 344
            ..||..:|.:..........|.|      .|::...::...:|:           |:||::.|:.
Human   518 PLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMIL 582

  Fly   345 RHEDKLMQRKFGFIIFDESHTLKNSKAKCTTTAKRLTDQAKRVVLLSGTPALSRPLELFTQLQMI 409
            ....:|.:..:..:|.||:|.|||...|.....|.:..:.|  |||:|||..:...|||:     
Human   583 ADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHK--VLLTGTPLQNSVEELFS----- 640

  Fly   410 DGKFMNFME-----FTTRYCDGKQSTFGWDANGQSNLEELKVILHLKYMLRRTKVEVLPQLAEKN 469
               .:||:|     ..|.:.:    .|| |...:..:::|:.||. ..||||.|.:|...||.| 
Human   641 ---LLNFLEPSQFPSETAFLE----EFG-DLKTEEQVKKLQSILK-PMMLRRLKDDVEKNLAPK- 695

  Fly   470 RETVVLDPALVWTNAETKETLDAFNKELK-TAKG--------------------------RATEE 507
            :||::   .:..||.:.|.......|... ..||                          ...||
Human   696 QETII---EVELTNIQKKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEE 757

  Fly   508 ILLRFYART---------------AEVKTRAVCAYLKTLVKEQKKFIIFAHHRVMMDAISDFLSG 557
            .:|..:.:|               |..|...:...|..|:....|.:||:.....:|.:.|:|..
Human   758 KILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQ 822

  Fly   558 LKVHYIRIDGQTRSDHRSDSVDTFQKKSSCK-VALLSLKACNSGITLTAAEIIVFAELDWNPSTL 621
            .:..|.||||:.|.:.|..::|.|.|..|.: |.||..:|...||.||||:..:..:.||||...
Human   823 RRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQND 887

  Fly   622 AQAESRAHRIGQTKPVICRYLIAHNTADDIIWN--MLK-----------------NKQEVLSKVG 667
            .||::|.|||||:|.|....||..|:.:..:::  .||                 |..:.|||:.
Human   888 LQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKME 952

  Fly   668 I---------------------FAEN-----LQKATHTAAPTSSHKIEEYFSPS-----TSTSLE 701
            :                     |.|.     ||:.|||....|..|...:...|     ..|.:.
Human   953 VEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDIS 1017

  Fly   702 PERNSIKQYFSTIPAKEPPEQNNNTEMT----KVNKAESDIAAFFNDDDDEAFLELD 754
            .:..:..|.::.|...:...:|....:.    :|.|......: |.:|:...|.|||
Human  1018 LDDPNFWQKWAKIAELDTEAKNEKESLVIDRPRVRKQTKHYNS-FEEDELMEFSELD 1073

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Marcal1NP_608883.1 HARP 160..216 CDD:462166
HepA <233..666 CDD:440319 135/517 (26%)
DEXHc_HARP_SMARCAL1 247..456 CDD:350768 59/236 (25%)
CHD6XP_016883588.1 PTZ00449 <105..374 CDD:185628
CD1_tandem_CHD5-9_like 289..354 CDD:349315
CD2_tandem_CHD5-9_like 373..431 CDD:349310
PLN03142 461..>986 CDD:215601 136/544 (25%)
DEXHc_CHD6 462..683 CDD:350816 59/236 (25%)
PHA03247 <2320..2694 CDD:223021
BRK 2403..2438 CDD:470653
Blue background indicates that the domain is not in the aligned region.

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