DRSC/TRiP Functional Genomics Resources

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Protein Alignment Marcal1 and CHR23

DIOPT Version :10

Sequence 1:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_197432.2 Gene:CHR23 / 832051 AraportID:AT5G19310 Length:1064 Species:Arabidopsis thaliana


Alignment Length:776 Identity:186/776 - (23%)
Similarity:297/776 - (38%) Gaps:198/776 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 LNALKAIK---QTSNRELSRGAAHPYQRPNG-----GNERNKPT-------LSLSSDKEKPVAVL 143
            |||::..:   |.|:|...       ||.:|     |.:|.:.|       ::|.||.::....|
plant   221 LNAVREFQLQIQASHRRCK-------QRNDGVQAWHGKQRQRATRAEKLRIMALKSDDQEEYMKL 278

  Fly   144 LGNSIT--CNLYLISTHRFAAQTSGYHEQLVTVFKNMPTKCYDGQTRIWSFDLSDYQSLKTHAAD 206
            ...|..  ..|:|..|::.........::......:..||...|.    ..||||..:       
plant   279 AKESKNEKLTLFLEETNKIFVSLGAAVQRQKDAKLSENTKLLKGS----ESDLSDVDA------- 332

  Fly   207 LKPYVHMNGIPKKVL-----------------DLCGQPPVVPERS---VLASIEPKLADQ----- 246
                      |:.||                 ||     :..||.   .:.||:.|:..|     
plant   333 ----------PEDVLPAQDIEIIDSDNNDDSNDL-----LEGERQFNLAIHSIQEKVTKQPSLLQ 382

  Fly   247 ---LMPFQQDGVCFAIA-----QKGRIMICDEMGLGKTYQALAVADYF---KD-DWPLLVCTTAS 299
               |..:|.:|:.:.::     ..|  ::.||||||||.|.:|:..|.   || ..|.|:....:
plant   383 GGELRSYQLEGLQWMVSLYNNDYNG--ILADEMGLGKTIQTIALIAYLLESKDLHGPHLILAPKA 445

  Fly   300 TRDSWAKHIMDLLPKVPIHYVQVLNNNQLYV------GEAKVLITSYNMMERHEDKLMQRKFGFI 358
            ...:|........|.:...........:..:      |:..||||.|:::.|.:..|.:..:.::
plant   446 VLPNWENEFALWAPSISAFLYDGSKEKRTEIRARIAGGKFNVLITHYDLIMRDKAFLKKIDWNYM 510

  Fly   359 IFDESHTLKNSK---AKCTTTAKRLTDQAKRVVLLSGTPALSRPLELFTQLQM----IDGKFMNF 416
            |.||.|.|||.:   ||...|..|:    ||.:||:|||..:...||::.|..    |.....||
plant   511 IVDEGHRLKNHECALAKTLGTGYRI----KRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSIHNF 571

  Fly   417 ME-FTTRYCD-GKQSTFGWDANGQSNLEELKVILHL-----KYMLRRTKVEVLPQLAEKNRETVV 474
            .| |.|.:.: |..|.        ::.|||.:|..|     .::|||.|.||...|..|.:..:.
plant   572 EEWFNTPFAECGSASL--------TDEEELLIINRLHHVIRPFLLRRKKSEVEKFLPGKTQVILK 628

  Fly   475 LDPALVWTNAETKETLDAFNKELKTAKGRATEEILLRFYARTAEVKTRAVC--AYL--------- 528
            .|.: .|.....|:..|.....|.:..|::..       .:...::.|..|  .||         
plant   629 CDMS-AWQKLYYKQVTDVGRVGLHSGNGKSKS-------LQNLTMQLRKCCNHPYLFVGADYNMC 685

  Fly   529 --KTLVKEQKKFIIF---------AHHRVMM--------DAISDFLSGLKVHYIRIDGQTRSDHR 574
              ..:|:...||.:.         |.||:::        |.:..:||.....|:|:||.|::|.|
plant   686 KKPEIVRASGKFELLDRLLPKLKKAGHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQR 750

  Fly   575 SDSVDTFQKKSS-CKVALLSLKACNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVI 638
            ...:..|.:..| ..:.|||.:|...|:.|..|:.|:..:.||||....|||.|||||||.|.|.
plant   751 GILLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVR 815

  Fly   639 CRYLIAHNTADDIIWNMLKNKQEVLSKV---GIFAENLQKATHTAAPTSSHKIEEYFSPSTST-- 698
            ...|::..:.:::|....|.|..:.:||   |:|      .|.:.|......:||..|..||:  
plant   816 VFVLVSIGSIEEVILERAKQKMGIDAKVIQAGLF------NTTSTAQDRREMLEEIMSKGTSSLG 874

  Fly   699 ------------------------SLEPERNSIKQYFSTI-PAKEPPE--QNNNTEMTKVN 732
                                    .::.||...:.|.:.: ..||.||  ..:.|:..|.|
plant   875 EDVPSEREINRLAARTEEEFWMFEQMDEERRKKENYKTRLMEEKEVPEWAYTSETQEDKTN 935

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Marcal1NP_608883.1 HARP 160..216 CDD:462166 7/55 (13%)
HepA <233..666 CDD:440319 132/503 (26%)
DEXHc_HARP_SMARCAL1 247..456 CDD:350768 64/237 (27%)
CHR23NP_197432.2 PLN03142 373..>893 CDD:215601 140/547 (26%)
SnAC 898..964 CDD:464219 10/38 (26%)

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