DRSC/TRiP Functional Genomics Resources

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Protein Alignment Marcal1 and CHR11

DIOPT Version :10

Sequence 1:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_001189826.1 Gene:CHR11 / 819814 AraportID:AT3G06400 Length:1057 Species:Arabidopsis thaliana


Alignment Length:556 Identity:134/556 - (24%)
Similarity:221/556 - (39%) Gaps:116/556 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 MICDEMGLGKTYQALAVADYFKD----DWPLLVCTTASTRDSWAKHIMDLLPKVPIHYVQVLNNN 326
            ::.||||||||.|.:::..|..:    :.|.:|....||..:|...|....|  .:..|:.|.|.
plant   211 ILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPKSTLGNWMNEIRRFCP--VLRAVKFLGNP 273

  Fly   327 Q---------LYVGEAKVLITSYNMMERHEDKLMQRKFGFIIFDESHTLKNSKAKCTTTAKRLTD 382
            :         |..|:..:.:||:.|..:.:..|.:..:.:||.||:|.:||..:..:.|.:..:.
plant   274 EERRHIREDLLVAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFST 338

  Fly   383 QAKRVVLLSGTPALSRPLELFTQLQMIDGKFMNFMEFTTRYCDGKQSTFG-W-DANGQSNLEELK 445
            ..:  :|::|||..:...||:..|..:..:..:..|           ||. | ..:|:::.:|:.
plant   339 NYR--LLITGTPLQNNLHELWALLNFLLPEIFSSAE-----------TFDEWFQISGENDQQEVV 390

  Fly   446 VILH---LKYMLRRTKVEVLPQLAEKNRETVVLDPALVWTNAETKETLDA-FNKELKTAKGRATE 506
            ..||   ..::|||.|.:|...|..| :||::    .|..:...|:...| ..|:|:........
plant   391 QQLHKVLRPFLLRRLKSDVEKGLPPK-KETIL----KVGMSQMQKQYYKALLQKDLEAVNAGGER 450

  Fly   507 EILLRFYARTAEVKTRAVCAY--------------------------------LKTLVKEQKKFI 539
            :.||..     .::.|..|.:                                |..|.:...:.:
plant   451 KRLLNI-----AMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVL 510

  Fly   540 IFAHHRVMMDAISDFLSGLKVHYIRIDGQTRSDHRSDSVDTFQKKSSCK-VALLSLKACNSGITL 603
            ||:....::|.:.|:|......|.||||.|..|.|..|::.:.|..|.| |.|||.:|...||.|
plant   511 IFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINL 575

  Fly   604 TAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPV-ICRYLIAHNTADDIIWNMLK---------- 657
            ..|::::..:.||||....||:.|||||||.|.| :.|:.......:.:|....|          
plant   576 ATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQ 640

  Fly   658 ----------NKQEVLSKVGIFAENLQKATHTAAPTSSHKIEEYFSPSTSTSLEPERNSIKQYFS 712
                      ||.|:|..|...||.:                  ||...||..:.:.:.|.....
plant   641 QGRLAEQKTVNKDELLQMVRYGAEMV------------------FSSKDSTITDEDIDRIIAKGE 687

  Fly   713 TIPAKEPPEQNNNTEMTKVNKAESDIAAFFNDDDDE 748
            ...|:...:....||.....|.:....|.|.|.||:
plant   688 EATAELDAKMKKFTEDAIQFKMDDSKGADFYDFDDD 723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Marcal1NP_608883.1 HARP 160..216 CDD:462166
HepA <233..666 CDD:440319 117/472 (25%)
DEXHc_HARP_SMARCAL1 247..456 CDD:350768 50/207 (24%)
CHR11NP_001189826.1 PLN03142 33..1052 CDD:215601 134/556 (24%)
Blue background indicates that the domain is not in the aligned region.

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