DRSC/TRiP Functional Genomics Resources

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Protein Alignment Marcal1 and ETL1

DIOPT Version :10

Sequence 1:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_178318.1 Gene:ETL1 / 814740 AraportID:AT2G02090 Length:763 Species:Arabidopsis thaliana


Alignment Length:534 Identity:131/534 - (24%)
Similarity:219/534 - (41%) Gaps:139/534 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 LMPFQQDGVCFAIA--QKG--RIMICDEMGLGKTYQALA----VADYFKDDWPLLVCTTASTRDS 303
            |.|:|..||.|.:.  :||  ..::.||||||||.||:.    ::....|..|.||...||..::
plant   213 LKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPASVLEN 277

  Fly   304 WAKHIMDLLPKVPI---H------YVQVLNNNQLYVGEA------KVLITSYNMMERHED----- 348
            |.:.:....|...:   |      |.:.||:    :.:|      .||:..|::.|||.:     
plant   278 WERELRKWCPSFTVLQYHGAARAAYSRELNS----LSKAGKPPPFNVLLVCYSLFERHSEQQKDD 338

  Fly   349 -KLMQR-KFGFIIFDESHTLKNSKAKCTTTAKRLTDQAKRVVLLSGTPALSRPLELFTQLQMIDG 411
             |:::| ::..::.||:|.||:..:........:...|.:.::|:|||..:...||::.|:    
plant   339 RKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELWSLLE---- 399

  Fly   412 KFMNFMEFTTRYCDGKQSTFGWDANGQSNLEELKVILHLK-----YMLRRTKVEVLPQLAEKNR- 470
             ||....|||...|.|:..         |.|:.::|..:|     ::|||.|.:|:.||..|.: 
plant   400 -FMLPDIFTTENVDLKKLL---------NAEDTELITRMKSILGPFILRRLKSDVMQQLVPKIQR 454

  Fly   471 -ETVVLD-------------------------------------------------------PAL 479
             |.|:::                                                       |.|
plant   455 VEYVLMERKQEDAYKEAIEEYRAASQARLVKLSSKSLNSLAKALPKRQISNYFTQFRKIANHPLL 519

  Fly   480 VWTNAETKE------------------TLDAFNKELKTAKGRATEEILLRFYARTAE-------- 518
            :......::                  :||...:|:|........::|.::.....:        
plant   520 IRRIYSDEDVIRIARKLHPIGAFGFECSLDRVIEEVKGFNDFRIHQLLFQYGVNDTKGTLSDKHV 584

  Fly   519 ---VKTRAVCAYLKTLVKEQKKFIIFAHHRVMMDAISDFLSGLKVHYIRIDGQTRSDHRSDSVDT 580
               .|.|.:...|.::.|...:.:||:....|:|.:...|..:.|.|.|:||.|:...|...|||
plant   585 MLSAKCRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDT 649

  Fly   581 FQKKSSCKVALLSLKACNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVICRYLIAH 645
            |....|....|||.:|...|:.||.|:.::..::|:||....|||.|.|||||||||....|:..
plant   650 FNNDKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTK 714

  Fly   646 NTADDIIWNMLKNK 659
            :|.|:.|:.:.|.|
plant   715 STVDENIYEIAKRK 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Marcal1NP_608883.1 HARP 160..216 CDD:462166
HepA <233..666 CDD:440319 131/534 (25%)
DEXHc_HARP_SMARCAL1 247..456 CDD:350768 64/243 (26%)
ETL1NP_178318.1 HepA <207..737 CDD:440319 131/534 (25%)
Blue background indicates that the domain is not in the aligned region.

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