DRSC/TRiP Functional Genomics Resources

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Protein Alignment Marcal1 and SMARCA2

DIOPT Version :10

Sequence 1:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_003061.3 Gene:SMARCA2 / 6595 HGNCID:11098 Length:1590 Species:Homo sapiens


Alignment Length:575 Identity:143/575 - (24%)
Similarity:233/575 - (40%) Gaps:147/575 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 MICDEMGLGKTYQALAVADYFKD----DWPLLVCTTASTR-------DSWAKHIMDLLPK----- 314
            ::.||||||||.|.:|:..|..:    :.|.|:....||.       |.||..::.:..|     
Human   746 ILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAM 810

  Fly   315 ----VPIHYVQVLNNNQLYVGEAKVLITSYNMMERHEDKLMQRKFGFIIFDESHTLKNSKAKCTT 375
                ||          ||..|:..||:|:|..:.:.:..|.:.::.::|.||.|.:||...|.|.
Human   811 RRSLVP----------QLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQ 865

  Fly   376 TAKRLTDQ-AKRVVLLSGTPALSRPLELFTQLQMIDGKFMNFMEFTT-RYCDGKQSTFGWDANG- 437
            ...  |.. |.|.:||:|||..::..||:.        .:||:..|. :.|    |||....|. 
Human   866 VLN--THYVAPRRILLTGTPLQNKLPELWA--------LLNFLLPTIFKSC----STFEQWFNAP 916

  Fly   438 ------QSNLEELKVILHLK--------YMLRRTKVEVLPQLAEKNRETVVLDPA----LVWTNA 484
                  :.:|.|.:.||.::        ::|||.|.||..||.||....:..|.:    :::.:.
Human   917 FAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHM 981

  Fly   485 ETKETLDAFNKELKTAKGRATEEILLRFYARTAEVKTRAVC--AYL------------------- 528
            :.|..|.....| |..||:...:.|:     ...::.|.:|  .|:                   
Human   982 QAKGILLTDGSE-KDKKGKGGAKTLM-----NTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVI 1040

  Fly   529 --KTLVKEQKKFIIF---------AHHRV--------MMDAISDFLSGLKVHYIRIDGQTRSDHR 574
              ..|.:...||.:.         .:|||        :|..:.|:.:.....|:|:||.|:|:.|
Human  1041 NGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDR 1105

  Fly   575 SDSVDTFQKK-SSCKVALLSLKACNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVI 638
            :..:..|.:. |...:.|||.:|...|:.|.||:.:|..:.||||....||:.|||||||...|.
Human  1106 AALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1170

  Fly   639 CRYLIAHNTADDIIWNMLKNKQEVLSKV---GIFAENLQKATHTAAPTSSHKIEEYFSPSTSTSL 700
            ...|...|:.::.|....|.|..|..||   |:|.:.          :|||:...:.    ...|
Human  1171 VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQK----------SSSHERRAFL----QAIL 1221

  Fly   701 EPERNSIKQYFSTIPAKEPPEQNNNTEMTKVNKAESDIAAFFNDDDDEAFLELDI 755
            |.|..:.::       .|.|:.....:|....:.|.|:           |:.:|:
Human  1222 EHEEENEEE-------DEVPDDETLNQMIARREEEFDL-----------FMRMDM 1258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Marcal1NP_608883.1 HARP 160..216 CDD:462166
HepA <233..666 CDD:440319 126/481 (26%)
DEXHc_HARP_SMARCAL1 247..456 CDD:350768 60/226 (27%)
SMARCA2NP_003061.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..71
Atrophin-1 <46..>450 CDD:460830
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..176
QLQ 173..207 CDD:462622
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..334
HSA 436..508 CDD:214727
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 551..592
BRK 589..632 CDD:462196
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 627..672
DEXHc_SMARCA2 701..951 CDD:350821 62/228 (27%)
PLN03142 720..>1202 CDD:215601 128/485 (26%)
DEGH box 851..854 2/2 (100%)
SnAC 1259..1326 CDD:464219 143/575 (25%)
Bromodomain 1333..>1419 CDD:445827
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1344..1383
Bromo_SNF2L2 1382..1506 CDD:99947
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1506..1590
Blue background indicates that the domain is not in the aligned region.

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