DRSC/TRiP Functional Genomics Resources

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Protein Alignment Marcal1 and SMARCA1

DIOPT Version :10

Sequence 1:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_001269803.1 Gene:SMARCA1 / 6594 HGNCID:11097 Length:1070 Species:Homo sapiens


Alignment Length:850 Identity:187/850 - (22%)
Similarity:305/850 - (35%) Gaps:229/850 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LASAPAT----------NGKSTTSATGATQHANNGKSNPNQPQAKSPLNFYRSPTGEQKKINRSG 82
            :|:|.||          .|.||:...||...|....:              .:..||:||     
Human    12 VAAADATATIVVIEDEQPGPSTSQEEGAAAAATEATA--------------ATEKGEKKK----- 57

  Fly    83 PTPGDNKSSSFLNALKAIKQTSNRELSRGAAHPYQRPNGGNERNKPTLSLSSDKEKPVAVLLGNS 147
                :...|||...|.|....|.:|:.    ..|:.            .:.:|:.|....||.  
Human    58 ----EKNVSSFQLKLAAKAPKSEKEMD----PEYEE------------KMKADRAKRFEFLLK-- 100

  Fly   148 ITCNLYLISTHRFA------AQTSGYHEQLVTVFKNMPTKCYDGQTRIWS------FDLSDYQSL 200
                    .|..||      ||.|          ...|.....|:.||..      ....||:..
Human   101 --------QTELFAHFIQPSAQKS----------PTSPLNMKLGRPRIKKDEKQSLISAGDYRHR 147

  Fly   201 KTHAADLKPYVHMNGIPKKVLDLCGQPPVVP---ERSVLASIEPKLADQLMPFQQDGVCFAIAQK 262
            :|...:.:..:..:   :|..::|.:..|.|   :...|...:.:..:.|:...::||      .
Human   148 RTEQEEDEELLSES---RKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGV------N 203

  Fly   263 GRIMICDEMGLGKTYQALAVADYFKD----DWPLLVCTTASTRDSWAKHIMDLLPKV-PIHYV-- 320
            |  ::.||||||||.|.:|:..|.|.    ..|.:|....||..:|.......:|.: .|.:|  
Human   204 G--ILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGD 266

  Fly   321 ----QVLNNNQLYVGEAKVLITSYNMMERHEDKLMQRKFGFIIFDESHTLKNSKAKCTTTAKRLT 381
                .....:::..||..|.:|||.|:.:.:....:..:.:::.||:|.:||.|:|.:...:.. 
Human   267 KDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREF- 330

  Fly   382 DQAKRVVLLSGTPALSRPLELFTQLQMIDGKFMNFME-----FTTRYCDGKQSTFGWDANGQSNL 441
             ::...:||:|||..:...||:..|..:.....|..:     |.|:.|.|.|..          :
Human   331 -KSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKL----------V 384

  Fly   442 EELKVILHLKYMLRRTKVEVLPQLAEKNRETVVLDPALV---WTNAETKETLDAFNKELKTAKGR 503
            |.|..:|. .::|||.|.:|...|..|....:.|..:.:   |......:.:|..|...|..|.|
Human   385 ERLHAVLK-PFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMR 448

  Fly   504 ATEEILLRF------------------YARTAEVKTRA----VCAYLKTLVKEQ-KKFIIFAHHR 545
            .. .||::.                  |.....:.:.:    |...|...:||| .:.:||:...
Human   449 LL-NILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMT 512

  Fly   546 VMMDAISDFLSGLKVHYIRIDGQTRSDHRSD------------SVDTFQKKSSCK-VALLSLKAC 597
            .::|.:.|:.......|.|:||||..:.|.|            :::.|...:|.| :.:||.:|.
Human   513 RLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAG 577

  Fly   598 NSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVICRYLIAHNTADDII---------- 652
            ..||.|.:|::::..:.||||....||..|||||||.|||....||..||.::.|          
Human   578 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRL 642

  Fly   653 -------WNMLKNKQEVLSKVGIFAENLQKATHTAAPTSSHKIEEYFSPSTSTSLE------PER 704
                   ..::..:...|:|    .|.||...|.|....:.|..|......:|.||      .|.
Human   643 DSIVIQQGRLIDQQSNKLAK----EEMLQMIRHGATHVFASKESELTDEDITTILERGEKKTAEM 703

  Fly   705 NS------------------------------IKQYFSTIPAKEPPEQNNNTEMTKVNKAESDIA 739
            |.                              .||....:...|||::.        .||...:.
Human   704 NERLQKMGESSLRNFRMDIEQSLYKFEGEDYREKQKLGMVEWIEPPKRE--------RKANYAVD 760

  Fly   740 AFFND 744
            |:|.:
Human   761 AYFRE 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Marcal1NP_608883.1 HARP 160..216 CDD:462166 12/67 (18%)
HepA <233..666 CDD:440319 122/504 (24%)
DEXHc_HARP_SMARCAL1 247..456 CDD:350768 56/224 (25%)
SMARCA1NP_001269803.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 25..82 17/83 (20%)
PLN03142 87..1069 CDD:215601 165/735 (22%)
DEAH box 311..314 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 831..861
Blue background indicates that the domain is not in the aligned region.

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