DRSC/TRiP Functional Genomics Resources

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Protein Alignment Marcal1 and SMARCAD1

DIOPT Version :10

Sequence 1:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_001121901.1 Gene:SMARCAD1 / 56916 HGNCID:18398 Length:1028 Species:Homo sapiens


Alignment Length:528 Identity:143/528 - (27%)
Similarity:221/528 - (41%) Gaps:121/528 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 EPKLADQ---LMPFQQDGV-CFAIAQKGRI--MICDEMGLGKTYQALAVADYF---KDDWPLLVC 295
            :|.:.:|   |.|:|:.|: ..|:..|..:  ::.||||||||.||:|...|.   .::.|.|:.
Human   487 QPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNNGPHLIV 551

  Fly   296 TTASTRDSWAKHIMDLLP--KVPIHY------VQVLNNNQLYVGEAKVLITSYN-MMERHEDKLM 351
            ..|||.|:|.:.:....|  ||..:|      .|:..|......:..|::|:|| .:...:|:.:
Human   552 VPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRYEDYNVIVTTYNCAISSSDDRSL 616

  Fly   352 QR--KFGFIIFDESHTLKNSKAKCTTTAKRLTDQAKRVVLLSGTPALSRPLELFTQLQMI-DGKF 413
            .|  |..:.||||.|.|||..:  ......:|..|...:||:|||..:..|||.:.|..: ...|
Human   617 FRRLKLNYAIFDEGHMLKNMGS--IRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVMPHMF 679

  Fly   414 MNFMEFTTRYCDGKQSTFGWDANGQSNLEELKVILHLK-----YMLRRTKVEVLPQLAEKNRETV 473
            .:......|....|..:    |:.|| :.|.:.|.|.|     ::|||.|.|||.||..|.    
Human   680 SSSTSEIRRMFSSKTKS----ADEQS-IYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKK---- 735

  Fly   474 VLDPALVWTNAETKET--LDAFNKELKTAKGRATEE------------------ILLRFYARTAE 518
              |...:...:|.:|.  |..||:..|:.....||:                  :|.|.| .|||
Human   736 --DRIELCAMSEKQEQLYLGLFNRLKKSINNLVTEKNTEMCNVMMQLRKMANHPLLHRQY-YTAE 797

  Fly   519 V----------------------------------------------------------KTRAVC 525
            .                                                          |.|.:.
Human   798 KLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRHINNFQLDMDLILDSGKFRVLG 862

  Fly   526 AYLKTLVKEQKKFIIFAHHRVMMDAISDFLSGLKVHYIRIDGQTRSDHRSDSVDTFQKKSSCKVA 590
            ..|..|.::..:.::|:...:|:|.:...|...:..|:|:||:|:...|...:|.|.......|.
Human   863 CILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVF 927

  Fly   591 LLSLKACNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVICRYLIAHNTADDIIWNM 655
            |||.||...||.||:|.:::..::|.||....|||.|.||:||||.|:...||:..|.::   :|
Human   928 LLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEE---SM 989

  Fly   656 LKNKQEVL 663
            ||..|:.|
Human   990 LKINQQKL 997

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Marcal1NP_608883.1 HARP 160..216 CDD:462166
HepA <233..666 CDD:440319 143/528 (27%)
DEXHc_HARP_SMARCAL1 247..456 CDD:350768 68/231 (29%)
SMARCAD1NP_001121901.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..82
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..251
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 302..328
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 354..373
HepA <496..999 CDD:440319 141/519 (27%)
DEGH box 628..631 2/2 (100%)
Nuclear localization signal. /evidence=ECO:0000255 721..738 10/22 (45%)
DEGD box 1007..1010
Blue background indicates that the domain is not in the aligned region.

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