DRSC/TRiP Functional Genomics Resources

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Protein Alignment Marcal1 and dom

DIOPT Version :9

Sequence 1:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_001286676.1 Gene:dom / 45655 FlyBaseID:FBgn0020306 Length:3233 Species:Drosophila melanogaster


Alignment Length:807 Identity:161/807 - (19%)
Similarity:280/807 - (34%) Gaps:248/807 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 SFLNALKAIKQTSNRE---LSRGAAHPYQRPNGGNERNKPTLSLSSDKEKPVAVLLGNSITCNLY 153
            |.:|.|..:::..|..   .:|....|:|.  .|...:.|.|.....:..|...:  |..|.||.
  Fly  1220 SVINVLMQLRKVCNHPNMFEARPTISPFQM--DGITFHTPRLVCDIMEYDPFTQI--NLETLNLL 1280

  Fly   154 LISTHRFAAQTSGYHEQLVT----VFKNMPT------KCYDGQTRIWSFDLSDYQSLKTHAADLK 208
            |:...:.......:..:|:.    :.:::.|      :|.:|:.|.         .::..:|:|.
  Fly  1281 LLHLEQTMTAYVSHKSRLLAPPRKLIEDIDTAPLPAPRCPNGKYRF---------HIRVRSAELA 1336

  Fly   209 PYVHMNGIPKKVLDLCGQPP--------VVPERSVLASIEPKLADQLMPFQQDGVCFAIAQKGRI 265
            ..:.:|.:  ||    |..|        ::|.|::|.|                        ||:
  Fly  1337 QRIKLNAV--KV----GASPAMRLEGSKIMPMRNLLPS------------------------GRV 1371

  Fly   266 MICDEMGLGKTYQALAVADYFKDDWPLLVCTTASTRDSWAKHIMDLLPKVPIHYVQVLNNNQLYV 330
            :......:.....||.         |:::.:..:|..|      ......|...:.||:|::|..
  Fly  1372 LKRVSASINPVNMALK---------PVVINSVVTTTSS------STTASSPTGALSVLSNSKLLG 1421

  Fly   331 GEAKVLITSYNMMERHEDKLMQRKFGFIIFDESHTLKNSKAKCT----TTAKRLTDQAKRVVLLS 391
            ..:::...:...:.    |.||....|.....:.....:.|:.|    |||...|..::..|..|
  Fly  1422 ARSQINAPTPAKVA----KTMQDGKPFFYLTPATNSGAAGARLTLTSKTTASASTTTSRTTVTAS 1482

  Fly   392 GTPALSRPLELFTQLQMIDGKFMNFMEFTTRYCDGKQSTFGWDANGQSNLEE-------LKVILH 449
            .|          :..|:|....:..:....:....|||.    |||::..||       .|| ..
  Fly  1483 TT----------SGQQLIRDPIVKDLATHVKSTVQKQSI----ANGKTEPEEETEAEDPYKV-QE 1532

  Fly   450 LKYMLRRTKVEVLPQLAEKNRETVVLDPALVWTNAETKETLDAFNKELKTAK------------- 501
            |..|.:..::..|.::|..||......|..   ..:.:|.:....:..::.|             
  Fly  1533 LIQMRKEQRLAALKRMAMINRRRTDATPIY---GEDCREAIQRCMQATRSLKRSTWQTRGYANCC 1594

  Fly   502 -------GRATEEILLRFYARTAEVK---------TRAVCA-----YLKTLVK-----EQK---- 536
                   |.:...:|..|..|.|::|         ..:|||     |::.|..     ||:    
  Fly  1595 TAMAHRNGWSLNHLLKSFEERCADLKPVFANFVIYVPSVCAPRIRRYVQNLSSTHWQHEQRIENI 1659

  Fly   537 ---------------------KF------------------------------IIFAHHRVMMDA 550
                                 ||                              :||.....|:|.
  Fly  1660 VDQALRPKLALLHPIISEMTTKFPDPRLIQYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDV 1724

  Fly   551 ISDFLSGLKVHYIRIDGQTRSDHRSDSVDTFQKKSSCKVALLSLKACNSGITLTAAEIIVFAELD 615
            :..||:.....|:|:||.||.:.|...::.|.........:||.::...||.||.|:.::|.:.|
  Fly  1725 LEAFLNYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGINLTGADTVIFYDSD 1789

  Fly   616 WNPSTLAQAESRAHRIGQTKPVICRYLIAHNTADDIIWNMLK--NKQEVLSKVGIFAENLQKATH 678
            |||:..|||:.|.||||||:.|....|::..|   |..|:||  |::.:||.:.|...|.     
  Fly  1790 WNPTMDAQAQDRCHRIGQTRDVHIYRLVSERT---IEVNILKKANQKRMLSDMAIEGGNF----- 1846

  Fly   679 TAAPTSSHKIEEYF---------------------------SPSTSTSLEPERNSIKQYFSTIPA 716
            |.....|..|::.|                           |.:.||.:|.|:.|::.:...:.|
  Fly  1847 TTTYFKSSTIKDLFTMEQSEQDESSQEKSENKDRIVATTTLSDTPSTVVETEKQSLRAFEHALAA 1911

  Fly   717 KEPPEQNNNTEMTKVNKAE--SDIAAF 741
               .|...:.:.||..|||  :|:|.|
  Fly  1912 ---AEDEQDVQATKTAKAEVAADLAEF 1935

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Marcal1NP_608883.1 HARP 160..215 CDD:284784 7/64 (11%)
DEXDc 239..420 CDD:214692 27/184 (15%)
DEXDc 265..394 CDD:238005 22/132 (17%)
Helicase_C 518..632 CDD:278689 42/187 (22%)
domNP_001286676.1 HSA 543..614 CDD:214727
ASF1_hist_chap <674..831 CDD:304562
FAM176 <824..>868 CDD:291517
SNF2_N 952..1238 CDD:278600 4/17 (24%)
DEXDc 969..1108 CDD:238005
Helicase_C 1692..1806 CDD:278689 32/113 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467179
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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