DRSC/TRiP Functional Genomics Resources

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Protein Alignment Marcal1 and CG7376

DIOPT Version :9

Sequence 1:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_001261471.1 Gene:CG7376 / 38715 FlyBaseID:FBgn0035689 Length:1270 Species:Drosophila melanogaster


Alignment Length:669 Identity:124/669 - (18%)
Similarity:230/669 - (34%) Gaps:222/669 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 NERNKPTLSLSSDKEKPVAVLLGNSITCNLYLIST-----HRFAAQTSGYHEQLVTVFKNMPTKC 182
            ||.|:..:|:.|       ||..::| .||...|:     |:.   |...|::.......:..|.
  Fly   667 NEYNEQNISVDS-------VLQIHAI-YNLLQASSLAPAEHKL---TELEHKKYQAQMSRLEWKY 720

  Fly   183 YDGQTRIWSFDLSDYQSLKTHAADLKPYVHMNGIPKKVLDLCGQPPVVPERSVLASIEPKLADQL 247
            .:..||:....||.|.......::|:.  ...|   ..|||.. ..|..:.|:..:|..|:.|..
  Fly   721 LEDNTRVLESALSSYNENLEKVSELEK--RFEG---STLDLLA-TMVNHKTSLHDAIWNKVRDDF 779

  Fly   248 MPFQQDGVCFAIAQKGRIMICDEMGLGKTYQALAVADYFKDDW---------PLL---------- 293
              |:|:   .::.:...:            .::|...||.|.|         .|:          
  Fly   780 --FRQN---ISVERLENV------------NSMAGMLYFMDIWHNKLQNLKSTLIAEFEFLKGVM 827

  Fly   294 --VCTTASTRDSWAKHIMDLLPKVPI-HYVQVLNNNQLYVGEAKVLITSYNMMERHEDKLMQRKF 355
              .|....|....:..|::.:..|.: |...:|:.|                    :||.::.| 
  Fly   828 QQACEAIKTGVLLSMEIINFIENVTVCHLTDILDAN--------------------KDKPVKPK- 871

  Fly   356 GFIIFDESH------TLKNS--KAKCTTTAKRLTDQAKRVVLLSGTPALSRP-LELFTQLQMIDG 411
                   .|      .:::|  :.:|...||:|.::|      :.|..|..| :|:         
  Fly   872 -------KHRYCRLCLIRDSLNQFECLLFAKKLDEKA------TVTEGLENPSMEI--------- 914

  Fly   412 KFMNFMEFTTRYCDGKQSTFGWDANGQSNLE-----------ELKVILHLKYM------LRRTKV 459
               :|::....:...||....|....||.||           ::|..:.::||      |...|:
  Fly   915 ---SFIKSIFAFLRSKQDFSEWKEECQSKLELLSCLQDLVKFQIKYWIEVEYMVKAFDELEMCKM 976

  Fly   460 EVL----PQLAEKNRETVV---LDPALVWT--NAET------------------KETLDAFNK-- 495
            .:|    |:  |::...::   ||..|.:.  |.:|                  ||  |:.:|  
  Fly   977 RILLTDDPE--EQSNYRILACQLDEQLQFNQYNLQTSQLNFTRLCGRLKYLKHLKE--DSADKPC 1037

  Fly   496 --------------------------ELKTAKGRA---------TEEILLRFYARTAEVK----- 520
                                      .::...|||         .:...|.:..|....|     
  Fly  1038 PICQTQDDVRYVMMVCGHFVCQHCLDSMRRKNGRAGVTKCPLCRQDSPQLYYSVRPGAHKSIIGD 1102

  Fly   521 -TRAVCAYLKTLVK-----EQKKFIIFAHHRVMMDAISDFLSGLKVHYIRIDG-QTRSDHRSDSV 578
             :..:.:.::.::|     ||:|.|:|:..:.::..|:..||        ::| |.|:...:...
  Fly  1103 FSTKISSVVELVLKIKGENEQEKIIVFSQWQAILIEIARALS--------LNGIQFRNKCTNKDF 1159

  Fly   579 DTFQKK-SSCKVALLSLKACNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVICRYL 642
            |.|:.. |:....|:.|...:.|:.|..|..:...|...||....||..|.||.||.:|......
  Fly  1160 DDFKNPLSNVTCLLMPLSKGSKGLNLIEATHVFLVEPILNPGDERQAIGRIHRFGQKRPTKVHRF 1224

  Fly   643 IAHNTADDIIWNMLKNKQE 661
            |.:.|.::.|.:::.:..:
  Fly  1225 IVNETIEENILSLITSADD 1243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Marcal1NP_608883.1 HARP 160..215 CDD:284784 9/54 (17%)
DEXDc 239..420 CDD:214692 33/211 (16%)
DEXDc 265..394 CDD:238005 23/158 (15%)
Helicase_C 518..632 CDD:278689 29/126 (23%)
CG7376NP_001261471.1 SNF2_N 221..601 CDD:278600
PHD_SF 281..320 CDD:304600
TPR 636..669 CDD:197478 1/1 (100%)
RING 1037..1083 CDD:238093 3/45 (7%)
HepA <1096..1238 CDD:223627 35/149 (23%)
Helicase_C 1108..1214 CDD:278689 28/113 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467242
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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