DRSC/TRiP Functional Genomics Resources

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Protein Alignment Marcal1 and CG7376

DIOPT Version :10

Sequence 1:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_648034.1 Gene:CG7376 / 38715 FlyBaseID:FBgn0035689 Length:1270 Species:Drosophila melanogaster


Alignment Length:669 Identity:124/669 - (18%)
Similarity:230/669 - (34%) Gaps:222/669 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 NERNKPTLSLSSDKEKPVAVLLGNSITCNLYLIST-----HRFAAQTSGYHEQLVTVFKNMPTKC 182
            ||.|:..:|:.|       ||..::| .||...|:     |:.   |...|::.......:..|.
  Fly   667 NEYNEQNISVDS-------VLQIHAI-YNLLQASSLAPAEHKL---TELEHKKYQAQMSRLEWKY 720

  Fly   183 YDGQTRIWSFDLSDYQSLKTHAADLKPYVHMNGIPKKVLDLCGQPPVVPERSVLASIEPKLADQL 247
            .:..||:....||.|.......::|:.  ...|   ..|||.. ..|..:.|:..:|..|:.|..
  Fly   721 LEDNTRVLESALSSYNENLEKVSELEK--RFEG---STLDLLA-TMVNHKTSLHDAIWNKVRDDF 779

  Fly   248 MPFQQDGVCFAIAQKGRIMICDEMGLGKTYQALAVADYFKDDW---------PLL---------- 293
              |:|:   .::.:...:            .::|...||.|.|         .|:          
  Fly   780 --FRQN---ISVERLENV------------NSMAGMLYFMDIWHNKLQNLKSTLIAEFEFLKGVM 827

  Fly   294 --VCTTASTRDSWAKHIMDLLPKVPI-HYVQVLNNNQLYVGEAKVLITSYNMMERHEDKLMQRKF 355
              .|....|....:..|::.:..|.: |...:|:.|                    :||.::.| 
  Fly   828 QQACEAIKTGVLLSMEIINFIENVTVCHLTDILDAN--------------------KDKPVKPK- 871

  Fly   356 GFIIFDESH------TLKNS--KAKCTTTAKRLTDQAKRVVLLSGTPALSRP-LELFTQLQMIDG 411
                   .|      .:::|  :.:|...||:|.::|      :.|..|..| :|:         
  Fly   872 -------KHRYCRLCLIRDSLNQFECLLFAKKLDEKA------TVTEGLENPSMEI--------- 914

  Fly   412 KFMNFMEFTTRYCDGKQSTFGWDANGQSNLE-----------ELKVILHLKYM------LRRTKV 459
               :|::....:...||....|....||.||           ::|..:.::||      |...|:
  Fly   915 ---SFIKSIFAFLRSKQDFSEWKEECQSKLELLSCLQDLVKFQIKYWIEVEYMVKAFDELEMCKM 976

  Fly   460 EVL----PQLAEKNRETVV---LDPALVWT--NAET------------------KETLDAFNK-- 495
            .:|    |:  |::...::   ||..|.:.  |.:|                  ||  |:.:|  
  Fly   977 RILLTDDPE--EQSNYRILACQLDEQLQFNQYNLQTSQLNFTRLCGRLKYLKHLKE--DSADKPC 1037

  Fly   496 --------------------------ELKTAKGRA---------TEEILLRFYARTAEVK----- 520
                                      .::...|||         .:...|.:..|....|     
  Fly  1038 PICQTQDDVRYVMMVCGHFVCQHCLDSMRRKNGRAGVTKCPLCRQDSPQLYYSVRPGAHKSIIGD 1102

  Fly   521 -TRAVCAYLKTLVK-----EQKKFIIFAHHRVMMDAISDFLSGLKVHYIRIDG-QTRSDHRSDSV 578
             :..:.:.::.::|     ||:|.|:|:..:.::..|:..||        ::| |.|:...:...
  Fly  1103 FSTKISSVVELVLKIKGENEQEKIIVFSQWQAILIEIARALS--------LNGIQFRNKCTNKDF 1159

  Fly   579 DTFQKK-SSCKVALLSLKACNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVICRYL 642
            |.|:.. |:....|:.|...:.|:.|..|..:...|...||....||..|.||.||.:|......
  Fly  1160 DDFKNPLSNVTCLLMPLSKGSKGLNLIEATHVFLVEPILNPGDERQAIGRIHRFGQKRPTKVHRF 1224

  Fly   643 IAHNTADDIIWNMLKNKQE 661
            |.:.|.::.|.:::.:..:
  Fly  1225 IVNETIEENILSLITSADD 1243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Marcal1NP_608883.1 HARP 160..216 CDD:462166 9/55 (16%)
HepA <233..666 CDD:440319 98/554 (18%)
DEXHc_HARP_SMARCAL1 247..456 CDD:350768 41/256 (16%)
CG7376NP_648034.1 DEXQc_SHPRH 160..513 CDD:350828
PHD_SF 281..320 CDD:473978
TPR 636..669 CDD:197478 1/1 (100%)
RING_Ubox 1036..1082 CDD:473075 3/45 (7%)
SF2_C_SNF 1104..1225 CDD:350180 31/128 (24%)
Blue background indicates that the domain is not in the aligned region.

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