DRSC/TRiP Functional Genomics Resources

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Protein Alignment Marcal1 and CG4049

DIOPT Version :9

Sequence 1:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_611885.3 Gene:CG4049 / 37860 FlyBaseID:FBgn0034976 Length:1669 Species:Drosophila melanogaster


Alignment Length:1075 Identity:178/1075 - (16%)
Similarity:314/1075 - (29%) Gaps:461/1075 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 NPNQPQAKSPLNFYRSPTGEQKKINRSGPTPGDNKSSSFLNALKAIKQTSNRELSRGAAHPYQRP 119
            ||....||:.:     |.|.::| |.:|.....||..|    :.|.::..|..|.:......   
  Fly   156 NPLAEVAKNTV-----PYGHKRK-NSAGEDQAANKKLS----MAAAEEKKNSHLRKNIRDVM--- 207

  Fly   120 NGGNERNKPTLSLSSDKEKP--VAVLLGNSITCNLYLISTHRFAAQTSGYHEQLVTVFK------ 176
               ||.|..|.:|::.:|:.  :|.:.|...:..         ..|....|:|:..:.:      
  Fly   208 ---NENNLDTTTLAAQREESERLARVAGQQKSMR---------EIQKQVVHKQIFRILQLDESEG 260

  Fly   177 ------------NMPTKCYDGQTRIWSFDLSDYQSLK-------TH-AADLKPY----------- 210
                        :.|....:.:....:||.|:..||.       .| .|.::|.           
  Fly   261 IESCAVANPVEHHPPVDFPEEEIASDTFDDSNSSSLSGGSIEDVLHKGASVQPSEVVTIDDSSDD 325

  Fly   211 ---------------------------VHMNGIPKKVLDLCGQPPV---VPERSVLASIEPKLAD 245
                                       :|:..| ..|.|..||..|   .||......:.|::|.
  Fly   326 DCILLSEEEEEEDDEDLNESDDATNSGMHVKDI-YNVPDENGQVVVNMAHPEGEETLYLAPQIAK 389

  Fly   246 QLMPFQQDGVCFA---IAQKGR---------IMICDEMGLGKTYQALAVADYF---KDDWPLLVC 295
            .:.|.|..||.|.   |.:..|         .::...||||||.|.::..|.|   .....:|..
  Fly   390 VIKPHQIGGVRFLYDNIIESTRRYNKSSGFGCILAHSMGLGKTLQVVSFCDIFLRHTSAKTVLCV 454

  Fly   296 TTASTRDSWAKHIMDLLPKV-------PIHY-VQVLNNNQL-----------YVGEAKVLITSYN 341
            ...:|..:|.......:|:.       |.:: :.|||:.|.           :|.:..||:..|.
  Fly   455 MPINTLQNWLSEFNMWIPRYSTDSNVRPRNFDIFVLNDQQKTLTARAKVILNWVHDGGVLLIGYE 519

  Fly   342 MMERHEDKLMQ---------RKFG---------------------FIIFDESHTLKNSKAKCTTT 376
            :......||::         |..|                     .:|.||.|.:|||.|..:..
  Fly   520 LFRLLALKLVKTRKRKGSVIRPDGMDSSSDLMNLVYEALVKPGPDLVICDEGHRIKNSHAGISLA 584

  Fly   377 AKRLTDQAKRVVLLSGTPALSRPLELFTQLQMIDGKFMNFMEFTTRYCDGKQSTFGWDANGQ--- 438
            .|.:  :.:|.::|:|.|..:..||.:.   |:|....|::...|.:|:..:...   .|||   
  Fly   585 LKEI--RTRRRIVLTGYPLQNNLLEYWC---MVDFVRPNYLGTRTEFCNMFERPI---QNGQCVD 641

  Fly   439 SNLEELKV------ILH---LKYMLRRTKVEV---LPQLAE------------------------ 467
            |..:::|:      :||   |.::.||:...:   |||..|                        
  Fly   642 STPDDIKLMRYRAHVLHSLLLGFVQRRSHTVLQLTLPQKYEYVILVKMTAFQRKLYDTFMTDVVR 706

  Fly   468 --------------------------------------------KNRETVVLDPAL--------- 479
                                                        |...|.:::|:.         
  Fly   707 TKAFPNPLKAFAVCCKIWNHPDVLYNFLKKCETDLDLEIDEEVTKGAATPIVEPSADSSLSLASP 771

  Fly   480 ----------------------------------------------------------------- 479
                                                                             
  Fly   772 LEKKINGSGDPINSIETFSKAENQTLFNIPASSDLNAKYLNKSPSFYDEKPEPLNYGSFGSEGKN 836

  Fly   480 -VWTNAE---------------------------TKETLDAFNKELKTAK--------------- 501
             .|.::.                           :.|.:|....|:||.:               
  Fly   837 NYWMDSSILPKPGCVEVIKQTDTNMSSNFESITGSSEIVDLDTNEIKTVETTIQAPCSNNQLDNG 901

  Fly   502 ---GRATE------------------EILLRFYARTAEVKTRAVCAYLKTLVKEQ---------- 535
               |:.:|                  :.||:...|..|..    |::...|:|..          
  Fly   902 CNAGKPSEWNAAGSKNSSGVAAAEPFKKLLKSKQRNEEFS----CSWAVDLMKNYVSGLISNSPK 962

  Fly   536 ---------------KKFIIFAHHRVMMDAISDFLSGLKV-----------HYIRIDGQTRSDHR 574
                           .:.::|:...:.::.:..:|....|           .|.|:||.|.|..|
  Fly   963 MEIFFCILKESLNLGDRILLFSQSLLTLNLLEVYLKSSYVPGSNQLWTKNSSYFRLDGSTSSQER 1027

  Fly   575 SDSVDTFQKKSSCKVALLSLKACNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVIC 639
            ...|:.|...|:.|:.|:|.:|.:.||.||.|..::..:..|||....||..|.:|.|||||...
  Fly  1028 ERLVNEFNANSNVKLFLISTRAGSLGINLTGANRVIIFDASWNPCHDTQAVYRIYRYGQTKPCFV 1092

  Fly   640 RYLIAHNTADDIIWNMLKNKQEVLSKVGIFAENLQKATHTAAPTSSHKIEEYFSPSTSTSLEPER 704
            ..::.....:..|::....||.:                      |.:|.:..:|....|::...
  Fly  1093 YRIVMDRCLEKKIYDRQIKKQGM----------------------SDRIVDECNPEAHLSMKDIT 1135

  Fly   705 NSIKQYFSTIPAKEPPEQNNNTEMTKVNKAESDIA 739
            |..:.|           .::...:.:|||:..|::
  Fly  1136 NLCQDY-----------DSDEDTVEEVNKSTGDLS 1159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Marcal1NP_608883.1 HARP 160..215 CDD:284784 13/118 (11%)
DEXDc 239..420 CDD:214692 53/244 (22%)
DEXDc 265..394 CDD:238005 38/180 (21%)
Helicase_C 518..632 CDD:278689 33/149 (22%)
CG4049NP_611885.3 SNF2_N 394..730 CDD:278600 66/343 (19%)
DEXDc 420..598 CDD:238005 37/179 (21%)
HELICc 958..1093 CDD:238034 34/134 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467223
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1000
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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