DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Marcal1 and Etl1

DIOPT Version :9

Sequence 1:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_609320.2 Gene:Etl1 / 34311 FlyBaseID:FBgn0032157 Length:844 Species:Drosophila melanogaster


Alignment Length:894 Identity:203/894 - (22%)
Similarity:345/894 - (38%) Gaps:255/894 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SQLLASAPATNGKSTTSATGATQHANNGKSNPNQPQ-AKSPLNFYRSPTGEQKKINRSGPTPGDN 88
            |.:.|||.|:   :::||..:.......:.|.|... ..||....|.|..::.::.....:.|::
  Fly     4 STVAASASAS---ASSSAKSSLSDLRQFRINKNASSVVASPSRTERVPGKKRIQVMADSDSDGND 65

  Fly    89 KSSSFLNALK-AIKQTSNRELSRGAAHPY---------------------------QRPNGGNER 125
            ..:.....|: .:|:...|.::.....|:                           .:|.|   .
  Fly    66 SQTPKKTKLELTVKEKEERYMAAAKISPHFDTMAIQESLSRTNWDVAASVRYLRENCKPKG---H 127

  Fly   126 NKPTLSLSSDKEKPVAVLLGNSITCNLYLISTHRFAAQTSGYHEQLVTVF------KNMPTKCYD 184
            |.|   |:..|.||    ..|.|:...:..:.|..........:|   |:      ..|.||...
  Fly   128 NGP---LAKSKLKP----RSNGISGGNFSDNDHSDDDDVKQSKDQ---VYDSDDSDSEMSTKMTG 182

  Fly   185 GQTRIWSF----DLSDYQSLKTHA-------ADLKPY------------VHMNG---------IP 217
            .:.:::.|    .|.:.||:||.:       .|::|:            :.|:|         |.
  Fly   183 QRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLLNYAQELIN 247

  Fly   218 KK-----VLDLCGQPPVVPERSVL--ASI--EPKLAD---QLMPFQQDGVCFAIA---QKGRIMI 267
            |:     :|..|.......|:::.  |.|  :|||..   ||..:|..|:.:...   |:...::
  Fly   248 KQNTVAAILSKCNNMVSRLEKAISNGAGIVEQPKLLSSGLQLADYQIIGLNWLTVMHKQEMNGIL 312

  Fly   268 CDEMGLGKTYQALAVADYFKDDW----PLLVCTTASTRDSWAKHIMDLLPKVPIHYVQVLNNNQL 328
            .||||||||.|.:|...|.|::.    ..|:...:||.|:|...|....|::.:         :.
  Fly   313 ADEMGLGKTIQVIAFLAYLKENGLSQAAHLIVVPSSTLDNWEAEISRWCPELVV---------EK 368

  Fly   329 YVGE-----------AK-------VLITSYNMM-ERHEDKLMQR--KFGFIIFDESHTLKNSKAK 372
            |.|.           ||       ||:|:|::: ...|::.|.|  |..::||||:|.|||    
  Fly   369 YHGSQDERRRMRGRFAKDGFTGFDVLLTTYHIVGSTPEERKMFRVCKLDYVIFDEAHMLKN---- 429

  Fly   373 CTTT--AKRLTDQAKRVVLLSGTPALSRPLELFTQLQMIDGKFM--NFMEFTTRYC-----DGKQ 428
            .||.  |..:|..|:..:||:|||..:..|||.:.|..:..||.  :..:..:.:.     ||.|
  Fly   430 MTTQRYANLITINARMRILLTGTPLQNNLLELISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGDQ 494

  Fly   429 ---STFGWDANGQSNLEELKVILHLKYMLRRTKVEVLPQLAEK---------------------- 468
               |.|     .::.::..|.|:. .::|||.|.:||..|.:|                      
  Fly   495 DEVSQF-----QETQIQRAKRIMK-PFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELVD 553

  Fly   469 ----NRETV-----------------VLDPALVWTNAETKETLDAFNKEL-------KTAKGRAT 505
                |:..|                 :.:..|:..:..|...|..|:|.|       ||.:....
  Fly   554 YYSNNKGEVCSSSERAGIAIMMEMRRIANHPLLMRHYFTDANLRGFSKRLANASSFKKTNEQYIF 618

  Fly   506 EEILL-------------RFYARTAEVKTRAVC-----AYLKTLVKEQK----KFIIFAHHRVMM 548
            ||:.:             .||  ..::....:|     .||.||:.:.|    :.::|:...:|:
  Fly   619 EELAVMSDFQVYQMMNKHEFY--DVKIPDNLICDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMML 681

  Fly   549 DAISDFLSGLKVHYIRIDGQTRSDHRSDSVDTFQKKSSCKVALLSLKACNSGITLTAAEIIVFAE 613
            |.:.::|...|..:.|:||.|..:.|.|.:..|....|..|.|||.||...||.||||:..|..:
  Fly   682 DIVEEYLRIRKFGFCRLDGATAVNVRQDLITDFNGDDSIFVFLLSTKAGGVGINLTAADTCVIHD 746

  Fly   614 LDWNPSTLAQAESRAHRIGQTKPVICRYLIAHNTADDIIWNMLKNKQEVLSKVGIFAENLQKATH 678
            :|:||....|||.|.||:||.:||....||:.:|.::   .:|...:|.|               
  Fly   747 IDFNPYNDKQAEDRCHRMGQQRPVTIYRLISESTIEE---GILMAAEEKL--------------- 793

  Fly   679 TAAPTSSHKIEEYFSPSTSTSLEPERNSIKQYFSTIPA-KEPPEQNNNT 726
                    |:|:..:.:....:..:|..:|...:.:.. |:..||.||:
  Fly   794 --------KLEKDITSNEKGEVHEQRCVVKLLTTALGLDKDQEEQLNNS 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Marcal1NP_608883.1 HARP 160..215 CDD:284784 14/83 (17%)
DEXDc 239..420 CDD:214692 64/217 (29%)
DEXDc 265..394 CDD:238005 47/155 (30%)
Helicase_C 518..632 CDD:278689 41/122 (34%)
Etl1NP_609320.2 SNF2_N 292..587 CDD:278600 76/313 (24%)
DEXDc 308..453 CDD:238005 47/157 (30%)
Helicase_C 651..765 CDD:278689 40/113 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467154
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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