Protein Alignment Marcal1 and Chd9

DIOPT Version :10

• Sequence 1: NP_608883.1
• Gene: Marcal1 / 33709
• FlyBaseID: FBgn0031655
• Length: 755
• Species: Drosophila melanogaster
• Sequence 2: XP_038953982.1
• Gene: Chd9 / 307726
• RGDID: 1306795
• Length: 2883
• Species: Rattus norvegicus
• Alignment Length: 803
• Identity: 182/803 - (22%)
• Similarity: 303/803 - (37%)
• Gaps: 239/803 - (29%)

  Fly     7 SEIAEKKR-----IALAKLQAKKSQLLASAPATNGKSTTSATGATQHANNGKSNPNQPQAKSPLN 66
            |::.||.:     |.|.|...::|:  :|...::.:.....|...||:...:||....:.|
  Rat   585 SKLKEKTKIGKLIITLGKNHKRRSE--SSDELSDAEQMPQHTFKEQHSQKRRSNRQVKRKK---- 643

  Fly    67 FYRSPTGEQ--------KKINR-SGPTPGDN---------------------------------- 88
            :.....|.|        .|:.| |.|.||:.
  Rat   644 YAEDAEGRQCEEEVRGSLKVKRTSAPPPGEQPLQLFVENPSEEDAAIVDKILACRTVKKEVSPGV 708

  Fly    89 -----------KSSSFLNAL----------KAIKQTSNRELSRGAAHPYQRPNGGNERNKP---- 128
                       |:.|:|:..          |.|:|...|...|.|...:...:...|...|
  Rat   709 MLDIEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFLADMEEEPFNPDYVE 773

  Fly   129 -----TLSLSSDKEKPVAVLLGNSITCNLYLISTHRFAAQTSGYHEQLVTVFKNMPTKCYDGQTR 188
                 .:|...||:      .|.|:.  .||:.                  :.::|   |:..|
  Rat   774 VDRILEVSFCEDKD------TGESVV--YYLVK------------------WCSLP---YEDST- 808

  Fly   189 IWSF----DLS---DYQSLKTHAADLKPYVHMNGIPKKVLDLCGQPPVVPERSVLASIEPKLADQ 246
             |..    ||:   :::.|:....|.:.           ||   :||....:.:..|.|.|..:|
  Rat   809 -WELKEDVDLAKIEEFEQLQASRPDTRQ-----------LD---RPPSNIWKKIDQSREYKNGNQ 858

  Fly   247 LMPFQQDG---VCFAIAQKGRIMICDEMGLGKTYQALAVADYFKDD-------WPLLVCTTASTR 301
            |..:|.:|   :.|....:...::.||||||||.|::.    |..:       .|.|:....||.
  Rat   859 LREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSIT----FLYEVLLTGIRGPFLIIAPLSTI 919

  Fly   302 DSWAKHI---MDLLPKVPIHY-----VQVLNNNQLYVGEA-----------KVLITSYNMMERHE 347
            .:|.:..   .|:  .|.:::     .|::...::|..::           :.:||::.|:....
  Rat   920 ANWEREFRTWTDI--NVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGC 982

  Fly   348 DKLMQRKFGFIIFDESHTLKNSKAKCTTTAKRLTDQAKRVVLLSGTPALSRPLELFTQLQMIDGK 412
            .:|...::..:|.||:|.|||...|.....|.:..:.|  |||:|||..:...|||:.|.
  Rat   983 GELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHK--VLLTGTPLQNTVEELFSLLH----- 1040

  Fly   413 FMNFMEFTTRYCDGKQST----FGWDANGQSNLEELKVILHLKYMLRRTKVEVLPQLAEKNRETV 473
            |:..:.|.:      :||    || |...:..:::|:.||. ..||||.|.:|..:||.| .||:
  Rat  1041 FLEPLRFPS------ESTFMQEFG-DLKTEEQVQKLQAILK-PMMLRRLKEDVEKRLAPK-EETI 1096

  Fly   474 VLDPALVWTNAETKETLDAFNK----------------------ELKTA-------KGRATEEIL 509
            :   .:..||.:.|.......|                      ||:..       || |.|:|:
  Rat  1097 I---EVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKG-AEEKII 1157

  Fly   510 LRF----------YARTAEVKTRAVCAYLKTLVKEQK----KFIIFAHHRVMMDAISDFLSGLKV 560
            ..|          :...|.:::......:..|:.:.|    |.:||:.....:|.:.|:|...:.
  Rat  1158 GEFRDTYNPSASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRY 1222

  Fly   561 HYIRIDGQTRSDHRSDSVDTFQKKSSCK-VALLSLKACNSGITLTAAEIIVFAELDWNPSTLAQA 624
            .|.||||:.|.:.|..::|.|.|..|.: |.||..:|...||.||||:..:..:.||||....||
  Rat  1223 LYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQA 1287

  Fly   625 ESRAHRIGQTKPVICRYLIAHNT 647
            ::|.|||||.|.|....|:..|:
  Rat  1288 QARCHRIGQNKAVKVYRLVTRNS 1310

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Marcal1	NP_608883.1	HARP	160..216	CDD:462166	8/62 (13%)
		HepA	<233..666	CDD:440319	130/492 (26%)
		DEXHc_HARP_SMARCAL1	247..456	CDD:350768	59/241 (24%)
Chd9	XP_038953982.1	KLF3_N	217..375	CDD:410554
		PTZ00121	<510..>765	CDD:173412	31/185 (17%)
		CD1_tandem_CHD5-9_like	685..749	CDD:349315	7/63 (11%)
		CD2_tandem_CHD5-9_like	769..827	CDD:349310	14/88 (16%)
		PLN03142	858..>1479	CDD:215601	127/479 (27%)
		BRK	2475..2515	CDD:462196
		BRK	2549..2593	CDD:197800