DRSC/TRiP Functional Genomics Resources

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Protein Alignment Marcal1 and Zranb3

DIOPT Version :9

Sequence 1:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster
Sequence 2:XP_006249763.1 Gene:Zranb3 / 304761 RGDID:1564952 Length:1083 Species:Rattus norvegicus


Alignment Length:587 Identity:198/587 - (33%)
Similarity:303/587 - (51%) Gaps:74/587 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 VLDLCGQP--PVVPE------RSV----------------------------LASIEPKLADQLM 248
            ::.|.|||  |:|.|      ||:                            |..:..||..:|:
  Rat     1 MIKLGGQPFCPLVKEPPFPTSRSLRLTMPTAGEKRKAPTPWTSYLTNEASAQLDFLPDKLRAKLL 65

  Fly   249 PFQQDGVCFAIAQKGRIMICDEMGLGKTYQALAVADYFKDDWPLLVCTTASTRDSWAKHIMDLLP 313
            |||:||:.||:.:.||.|:.||||||||.||:|::.::|::||||:...:|.|..|.:.:...:|
  Rat    66 PFQKDGIVFALRRGGRCMVADEMGLGKTIQAIAISYFYKEEWPLLIVVPSSLRYPWIEELEKWIP 130

  Fly   314 KVPIHYVQVLNN--NQLYVGEAKVLITSYNMMERHEDKLMQ----RKFGFIIFDESHTLKNSKAK 372
            ::....:.|:.|  :...:..::|.:..|.::....:.|::    :.|..:|.||||.:|:..|.
  Rat   131 ELEPEEINVITNKTDTGRIATSRVTVLGYGLLTTDAETLLEALDRQNFRVVIVDESHYMKSRTAA 195

  Fly   373 CTTTAKRLTDQAKRVVLLSGTPALSRPLELFTQLQ-MIDGKFMNFMEFTTRYCDGKQSTFG---- 432
            .:.....:..:|:|.:||:|||||.||.|||.|:: :...:|..::|:..|||:.....||    
  Rat   196 RSKILLPMVQKAQRAILLTGTPALGRPEELFMQIEALFPQRFGTWVEYAKRYCNAHIRYFGKRRQ 260

  Fly   433 WDANGQSNLEELKVILHLKYMLRRTKVEVLPQLAEKNRETVVLD--PALVWTNAETKETLDAFNK 495
            ||..|.|||.||..:|: ..|:||.|.|||.||..|.|:.:..|  ||.|   .|...:.:.:.|
  Rat   261 WDCRGASNLSELHQLLN-DIMIRRLKSEVLSQLPPKVRQRIPFDLAPATV---KELNASFEEWQK 321

  Fly   496 ELKTAKGRATEEI---LLRFYARTAEVKTRAVCAYLKTLVK-EQKKFIIFAHHRVMMDAISDFLS 556
            .::.....|.|.:   :.|.:.:||..|..||..|:|.|:: :..||::||||..|:.|.::.:.
  Rat   322 LMRAPDAGAMETVMGLITRMFKQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSMLQACTEAVI 386

  Fly   557 GLKVHYIRIDGQTRSDHRSDSVDTFQKKSSCKVALLSLKACNSGITLTAAEIIVFAELDWNPSTL 621
            ..|..||||||...|..|...|:.|||....:||:||::|...|:|.|||..:|||||.|:|..:
  Rat   387 ESKARYIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELFWDPGHI 451

  Fly   622 AQAESRAHRIGQTKPVICRYLIAHNTADDIIWNMLKNKQEVL-SKVGIFAENLQKATH------- 678
            .|||.|||||||...|...||||:.|.|.::|.||..|.:|. |.:....|.|| ||.       
  Rat   452 KQAEDRAHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKLQ-ATEDDKEKWG 515

  Fly   679 ----TAAPTSSHKIEEYFSPSTSTSLEPER-NSIKQYFSTIPAKEPPEQNNNTEMTKVNKAESDI 738
                ..|.|.|...||...| ..|..|.|: :.|:.:|...|.|.|.|.:.  :..:..|.::.:
  Rat   516 FLQFAEAWTPSDSFEELKDP-VFTHFEKEKQHDIRSFFLPKPRKRPLETSG--DAAEAVKEKTTV 577

  Fly   739 AA 740
            |:
  Rat   578 AS 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Marcal1NP_608883.1 HARP 160..215 CDD:284784
DEXDc 239..420 CDD:214692 63/187 (34%)
DEXDc 265..394 CDD:238005 39/134 (29%)
Helicase_C 518..632 CDD:278689 51/114 (45%)
Zranb3XP_006249763.1 DEXDc 56..239 CDD:214692 62/182 (34%)
DEXDc 82..217 CDD:238005 39/134 (29%)
Helicase_C 357..462 CDD:278689 47/104 (45%)
ZnF_RBZ 648..670 CDD:197784
RanBP2-type Zn finger 648..667 CDD:275376
HNHc <1014..1053 CDD:238038
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 159 1.000 Domainoid score I3990
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1082831at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101361
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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