DRSC/TRiP Functional Genomics Resources

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Protein Alignment Marcal1 and CHD5

DIOPT Version :10

Sequence 1:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_056372.1 Gene:CHD5 / 26038 HGNCID:16816 Length:1954 Species:Homo sapiens


Alignment Length:774 Identity:176/774 - (22%)
Similarity:293/774 - (37%) Gaps:186/774 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 YQRPN-----------GGNE-------RNKPTLSLSSDKE------KPVAVLLGNSITCNLYLIS 156
            |||.|           .|:|       :||..|....::.      ||..::        ::.|.
Human   542 YQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMM--------IHRIL 598

  Fly   157 THRFAAQTSGYHEQLVTVFKNMPTKCYDGQTRIWSFDLSD---YQSLKT----H-----AADLKP 209
            .|.|..:...::   :..:|::|   ||..|  |..|..|   |.:||.    |     ..|.: 
Human   599 NHSFDKKGDVHY---LIKWKDLP---YDQCT--WEIDDIDIPYYDNLKQAYWGHRELMLGEDTR- 654

  Fly   210 YVHMNGIPKKVL--------DLCGQPPVVP--ERSVLASIEPKLADQ----LMPFQQDG---VCF 257
                  :||::|        |...:||..|  :.:|....:|...|.    |.|:|.:|   :.|
Human   655 ------LPKRLLKKGKKLRDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRF 713

  Fly   258 AIAQKGRIMICDEMGLGKTYQALA-VADYFKD---DWPLLVCTTASTRDSWAKHIMDLLPKVPIH 318
            :.||....::.||||||||.|.:. :...:|:   ..|.||....||..:|.:   :.....|..
Human   714 SWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWER---EFEMWAPDF 775

  Fly   319 YV----------QVLNNNQL-----YVGEAK--------------VLITSYNMMERHEDKLMQRK 354
            ||          .|:..|:.     .:...|              ||:|||.::...:..|...:
Human   776 YVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIE 840

  Fly   355 FGFIIFDESHTLKNSKAKCTTTAKRLTDQAKRVVLLSGTPALSRPLELFTQLQMIDGKFMNFMEF 419
            :..::.||:|.|||:::|............|  :||:|||..:...|||..|..:..:..|.:| 
Human   841 WACLVVDEAHRLKNNQSKFFRVLNSYKIDYK--LLLTGTPLQNNLEELFHLLNFLTPERFNNLE- 902

  Fly   420 TTRYCDGKQSTFGWDANGQSNLEELKVILHLKYMLRRTKVEVLPQLAEKNRETVVLDPALVWTNA 484
                  |....|. |.:.:..:::|..:|. .:||||.|.:|...:..|..  :::...|.....
Human   903 ------GFLEEFA-DISKEDQIKKLHDLLG-PHMLRRLKADVFKNMPAKTE--LIVRVELSQMQK 957

  Fly   485 ETKETLDAFNKELKTAKGRATEEILLRF----------------------------YARTAEVKT 521
            :..:.:...|.|...:||...:..||..                            |..::.||:
Human   958 KYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKS 1022

  Fly   522 RAVCAYLKTLVK----EQKKFIIFAHHRVMMDAISDFLSGLKVHYIRIDGQTRSDHRSDSVDTFQ 582
            ......|:.::|    |..:.:||:....|:|.:.|||......|.||||......|.:::|.|.
Human  1023 SGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFN 1087

  Fly   583 KKSSCKVA-LLSLKACNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVICRYLIAHN 646
            ...:.:.. |||.:|...||.|..|:.::..:.||||....||.||||||||.|.|:....:...
Human  1088 APGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRA 1152

  Fly   647 TADDIIWNMLKNKQ---EVLSKVGIFAENLQKATHTAAPTSSHKIEEYFSPSTSTSLE------- 701
            :.::.|..:.|.|.   .::.:.|:.:::................||.|.......:.       
Human  1153 SVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMMSQGQRPVT 1217

  Fly   702 --PERNSIKQYFSTIPAKE-----PPEQNNNTEMTKVNKAESDIAAFFNDDDDEAFLEL 753
              |:..|.|.......||:     ||..|.:.|       :|.:..:    ||.|..:|
Human  1218 PIPDVQSSKGGNLAASAKKKHGSTPPGDNKDVE-------DSSVIHY----DDAAISKL 1265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Marcal1NP_608883.1 HARP 160..216 CDD:462166 14/67 (21%)
HepA <233..666 CDD:440319 124/508 (24%)
DEXHc_HARP_SMARCAL1 247..456 CDD:350768 61/244 (25%)
CHD5NP_056372.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..134
CHDNT 145..200 CDD:462357
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 225..338
Histone-binding 343..653 26/126 (21%)
PHD1_CHD_II 345..387 CDD:277006
PHD2_CHD_II 418..460 CDD:277007
CD1_tandem_CHD3-4_like 465..544 CDD:349314 1/1 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 549..571 2/21 (10%)
CD2_tandem_CHD3-4_like 589..642 CDD:349309 15/68 (22%)
PLN03142 698..>1214 CDD:215601 125/531 (24%)
DEAH box 847..850 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1209..1253 9/50 (18%)
DUF1087 1298..1351 CDD:461922
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1351..1411
CHDII_SANT-like 1389..1529 CDD:461920
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1524..1564
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1597..1640
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1658..1696
CHDCT2 1733..1878 CDD:462358
Blue background indicates that the domain is not in the aligned region.

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