DRSC/TRiP Functional Genomics Resources

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Protein Alignment Marcal1 and Hel89B

DIOPT Version :10

Sequence 1:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster
Sequence 2:XP_321235.5 Gene:Hel89B / 1281292 VectorBaseID:AGAMI1_004308 Length:2067 Species:Anopheles gambiae


Alignment Length:737 Identity:171/737 - (23%)
Similarity:286/737 - (38%) Gaps:169/737 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 PTLSLSSDKEKPVAVLLGNSITCNLYLISTHRFAAQTSGYHEQLVTVFKNMPTKCYDG------- 185
            |.|...||.::.|.            |:|||.||           |:.:.||   .||       
Mosquito  1380 PLLGRMSDPDQSVR------------LVSTHCFA-----------TLIQLMP---LDGLGTSGDG 1418

  Fly   186 --QTRIWSFDLSDYQSLKTHAADLKPYVHMNGIPKKVLDLCGQPPVVPERSVLASIEPKLADQLM 248
              ..|..|.||.. :.:|               .::.|:....|..:|:    ..:..|:..:|.
Mosquito  1419 GASGRHLSDDLRQ-RKMK---------------DRRFLEYLFSPKTIPD----VELPVKINAELR 1463

  Fly   249 PFQQDGV---CFAIAQKGRIMICDEMGLGKTYQALAV--ADYFK-------DDWPLLVCTTASTR 301
            .:||.||   .|....|...::||:||||||.||:.:  ||:.:       ...|.:|....:..
Mosquito  1464 SYQQSGVNWLWFLNRYKLHGILCDDMGLGKTLQAICILAADHHQRSLDRGCAQLPSIVICPPTLT 1528

  Fly   302 DSWAKHIMDLLPK---VPIHYVQVLNNNQLY---VGEAKVLITSYNMMERHEDKLMQRKFGFIIF 360
            ..|...:...||.   .|:|||.:..|.:..   :|...:::.||:::.:..:......:.:.|.
Mosquito  1529 GHWVYEVEKFLPSRFLRPLHYVGLPGNREQLRQKLGTYNLIVASYDIVRKDIEFFSSVNWNYCIL 1593

  Fly   361 DESHTLKNSKAKCTTTAKRLTDQAKRVVLLSGTPALSRPLELFTQLQMIDGKFMNF-MEFTTRYC 424
            ||.|.:||.:.|.:...|:|.  |...::|||||..:..|||::....:...|:.. .:|:||:.
Mosquito  1594 DEGHIIKNGRTKSSKAIKQLV--ANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFSTRFS 1656

  Fly   425 -------DGKQSTFGWDANGQSNLEELKVILH---LKYMLRRTKVEVLPQLAEKNRETVV--LDP 477
                   |.|.|....:| |...:|    .||   |.::|||.|.:||..|..|..:.::  |.|
Mosquito  1657 RPILASRDPKSSPKEQEA-GALAME----ALHRQVLPFLLRRVKEDVLTDLPPKITQDLLCELSP 1716

  Fly   478 ----------ALVWTNAETKETLDAFNKELKTAKGRATE-------------------------- 506
                      .:...:::.:|.|:..:.::.....:.|.                          
Mosquito  1717 LQERLYEDFSRMHLHSSDIRECLENIDGQMAGPANKKTHVFQALRYLQNVCNHPKLVLSPSHPEY 1781

  Fly   507 EILLRFYARTA----EVKTRAVCAYLKTLVKE------------QKKFIIFAHHRVMMDAISDFL 555
            ::::..:.|..    :::..|....||.|:.:            |.:.:||...:.|:|.:.:.|
Mosquito  1782 QMIVGEFTRNGSSMDDIEHSAKLPVLKQLLLDCGIGTNEDVSVNQHRALIFCQLKAMLDIVENDL 1846

  Fly   556 SGLKVH-----YIRIDGQTRSDHRSDSVDTFQKKSSCKVALLSLKACNSGITLTAAEIIVFAELD 615
              ||.|     |:|:||......|...|..|....|..|.||:.:....|:.||.|:.::|.|.|
Mosquito  1847 --LKKHLPAVSYLRLDGSVPPSTRHHIVTKFNGDPSIDVLLLTTQVGGLGLNLTGADTVIFVEHD 1909

  Fly   616 WNPSTLAQAESRAHRIGQTKPVICRYLIAHNTADDIIWNMLKNKQEVLSKVGIFAENLQKAT--- 677
            |||....||..|||||||.|.|....||...:.::.|..:.|.|....:.| :..||....|   
Mosquito  1910 WNPMKDLQAMDRAHRIGQKKVVNVYRLITRKSLEEKIMGLQKFKLLTANTV-VSDENASMDTMGT 1973

  Fly   678 ------HTAAPTSSHKIEEYFSPSTSTSLEPERNSIKQYFSTIPAKEPPEQNNNTEMTKVNKAES 736
                  .|.|..|. |.:.......:|::...|.|::...:...|....|.|.:.....:.....
Mosquito  1974 DQLLDLFTLADDSG-KQQRAGGGGATTAVSDRRGSLRSAAAASNAAAQLEANGSNGGAAIKTVLE 2037

  Fly   737 DIAAFFNDD------DDEAFLE 752
            ::...::|.      |...|||
Mosquito  2038 NLPELWDDSQYHEEYDLSQFLE 2059

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Marcal1NP_608883.1 HARP 160..216 CDD:462166 12/64 (19%)
HepA <233..666 CDD:440319 128/520 (25%)
DEXHc_HARP_SMARCAL1 247..456 CDD:350768 64/237 (27%)
Hel89BXP_321235.5 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
DUF3535 715..1242 CDD:463447
HepA <1453..1962 CDD:440319 129/518 (25%)
Blue background indicates that the domain is not in the aligned region.

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