DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Marcal1 and brm

DIOPT Version :10

Sequence 1:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster
Sequence 2:XP_061518350.1 Gene:brm / 1272575 VectorBaseID:AGAMI1_001677 Length:1667 Species:Anopheles gambiae


Alignment Length:891 Identity:196/891 - (21%)
Similarity:325/891 - (36%) Gaps:244/891 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 AEKKRIALAKLQAKKSQLLASAPATNGKSTTSATGATQHANN----GKSNPNQPQAKSPLNFYRS 70
            ||:||      :.|..:.|||. ..:||....     .|.||    |:.|      |:.:|::.:
Mosquito   585 AERKR------RQKHQEFLASV-LQHGKDFKE-----YHRNNIAKLGRLN------KAVMNYHAN 631

  Fly    71 PTGEQKKINRSGPTPGDNKSSSFLNALKAIKQTSNRELSRGAAHPYQRPNGGNERNKPTLSLSSD 135
            ...||||                  ..:.|::...|.|.......|::            .:...
Mosquito   632 AEREQKK------------------EQERIEKERMRRLMAEDEEGYRK------------LIDQK 666

  Fly   136 KEKPVAVLLGNS---ITCNLYLISTHRFAAQ------------------TSGYHEQL-------- 171
            |:|.:|.||..:   |:....::..|:...:                  .||..|.|        
Mosquito   667 KDKRLAFLLSQTDEYISNLTEMVKQHKVDQKKKQDDEIQRKKQLKRHILESGDIEHLDEHCEASD 731

  Fly   172 --VTVFKNMPTKCYDGQTRIWSFDLSDYQSLKTHAADLKPYVHMNG---------------IPKK 219
              |||.:....|...|....:..||..:  |:.|..  ..||..:|               .|::
Mosquito   732 CRVTVMETATGKMISGDDAPFLRDLHSW--LQLHPG--WEYVISDGDADDDEEESEGGKKKTPEE 792

  Fly   220 VLDLCGQPPVVPER----------------SVLASIEPKLADQ--------LMPFQQDGVCFAIA 260
            .|....:...|.::                |:..::..|:.:|        |..:|..|:.:.::
Mosquito   793 ELSDDAKTKEVIQKAKVEDDEYKTEEQTYYSIAHTVHEKVTEQASILVNGKLKEYQIKGLEWLVS 857

  Fly   261 QKGRIM---ICDEMGLGKTYQALAVADYF----KDDWPLLVCTTASTRDSWAKHIMDLLPKVPI- 317
            .....:   :.||||||||.|.:|:..|.    |::.|.||....||..:|........|.|.: 
Mosquito   858 LFNNNLNGILADEMGLGKTIQTIALVTYLMEKKKNNGPYLVIVPLSTLSNWVLEFEKWAPAVGVV 922

  Fly   318 ---------HYVQVLNNNQLYVGEAKVLITSYNMMERHEDKLMQRKFGFIIFDESHTLKNSKAKC 373
                     ..||    ||:...:..||:|:|..:.:.:..|.:..:.::|.||.|.:||...|.
Mosquito   923 AYKGSPAGRRAVQ----NQMKATKFNVLLTTYEYVIKDKAVLAKISWKYMIIDEGHRMKNHHCKL 983

  Fly   374 TTTAKRLTDQAKRVVLLSGTPALSRPLELFTQLQMIDGKFMNFMEFTTRYCDGKQSTFGWDANGQ 438
            |.......:...| :||:|||..::..||:..|..:............::.:...:|.|    .:
Mosquito   984 TQVLNTHYNAPHR-LLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG----EK 1043

  Fly   439 SNLEELKVILHLK--------YMLRRTKVEVLPQLAEKNRETVVLDPA----LVWTNAETKETLD 491
            ..|.|.:.||.::        ::|||.|.||..||.:|....|..|.:    :::.:.::|..|.
Mosquito  1044 VELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIVKCDMSGLQRVLYKHMQSKGVLL 1108

  Fly   492 AFNKELKTAKGRATEEILLRFYARTAEVKTRAVCAYL----------------------KTLVKE 534
            ....| |..||:...:.|:     ...|:.|.:|.:.                      ..|.:.
Mosquito  1109 TDGSE-KGNKGKGGAKALM-----NTIVQLRKLCNHPFMFQHIEEKYCDHIGVQGTVTGPDLYRA 1167

  Fly   535 QKKFIIF---------AHHRVM--------MDAISDFLSGLKVHYIRIDGQTRSDHRSDSVDTFQ 582
            ..||.:.         ..|||:        |..|.|:||.....|:|:||.|:|:.|.|.:..|.
Mosquito  1168 SGKFELLDRILPKLKATGHRVLLFCQMTQCMTIIEDYLSWRGFGYLRLDGTTKSEERGDLLKKFN 1232

  Fly   583 KKSS-CKVALLSLKACNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVICRYLIAHN 646
            .|:| ..:.|||.:|...|:.|..|:.:|..:.||||....||:.|||||||...|....|:..|
Mosquito  1233 SKNSDYFLFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVN 1297

  Fly   647 TADDIIWNMLK---NKQEVLSKVGIFAENLQKATHTAAPTSSHKIEEYFSPSTSTSLEPERNSIK 708
            :.::.|....:   |..|.:.:.|:|.   ||:|.:                       ||....
Mosquito  1298 SVEERILAAARYKLNMDEKVIQAGMFD---QKSTGS-----------------------ERQQFL 1336

  Fly   709 QYFSTIPAKEPPEQNNNTEMTKVNKAESDIAAFFNDDDDEAFLELD 754
            |........:..|:|...:...:|...|.     .||:.|.|.::|
Mosquito  1337 QSILHQDEMDEEEENEVPDDEMINLMISR-----TDDELELFKKMD 1377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Marcal1NP_608883.1 HARP 160..216 CDD:462166 16/98 (16%)
HepA <233..666 CDD:440319 128/528 (24%)
DEXHc_HARP_SMARCAL1 247..456 CDD:350768 56/233 (24%)
brmXP_061518350.1 None

Return to query results.
Submit another query.