DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon25Bi and psh

DIOPT Version :10

Sequence 1:NP_001033873.1 Gene:Jon25Bi / 33708 FlyBaseID:FBgn0020906 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster


Alignment Length:269 Identity:76/269 - (28%)
Similarity:114/269 - (42%) Gaps:76/269 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 IVNGYPAYEGKAPYTVGLGFSGNG-GWWCGGSIIAHDWVLTAAHCTNGASQVTIYYGATWRTNAQ 100
            ||.|||...|..|:...:|:...| .:.||||:||..:|||||||.|              |:|.
  Fly   144 IVGGYPVDPGVYPHMAAIGYITFGTDFRCGGSLIASRFVLTAAHCVN--------------TDAN 194

  Fly   101 FTHTVGSGDF-IQNHNWPNQNGNDIALIRTPHVDFWHMVNK------VEL--------------- 143
            ....|..|.. |:|   |:.:..|| :||:..:...::.||      :||               
  Fly   195 TPAFVRLGAVNIEN---PDHSYQDI-VIRSVKIHPQYVGNKYNDIAILELERDVVETDNIRPACL 255

  Fly   144 ------PSFNDRYNMYDNYWAVACGWGL--TTAGSQPDWMECVDLQIISNSECSRTYGTQP---- 196
                  |..|.::        ...|||:  .|..::...:....|:::...:|:.:|..||    
  Fly   256 HTDATDPPSNSKF--------FVAGWGVLNVTTRARSKILLRAGLELVPLDQCNISYAEQPGSIR 312

  Fly   197 -------DGILC-VSTSGGKSTCSGDSGGPLV----LHDG-GRLVGVTSWVSGNGCTAGLPSGFT 248
                   |.:|| :........|.|||||||:    :.|| ..::||.|  ||.||....|..:|
  Fly   313 LLKQGVIDSLLCAIDQKLIADACKGDSGGPLIHELNVEDGMYTIMGVIS--SGFGCATVTPGLYT 375

  Fly   249 RVTNQLDWI 257
            ||::.||:|
  Fly   376 RVSSYLDFI 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon25BiNP_001033873.1 Tryp_SPc 36..257 CDD:214473 75/267 (28%)
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 144..387 CDD:238113 76/269 (28%)
Blue background indicates that the domain is not in the aligned region.

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