DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon25Bii and CG5246

DIOPT Version :10

Sequence 1:NP_608882.1 Gene:Jon25Bii / 33707 FlyBaseID:FBgn0031654 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster


Alignment Length:298 Identity:83/298 - (27%)
Similarity:124/298 - (41%) Gaps:73/298 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LFLTVLAVAIACAAAQPE------------KVKPVPLKDAVLGSGSGSIEGRITNGYPAYEGKVP 55
            :.::||.:...|:|...:            .|||               |.|:..|..:..|..|
  Fly     5 VLISVLVILSQCSAKSVKIHRRHQLNHHLGHVKP---------------ETRVIGGVDSPTGFAP 54

  Fly    56 YIVGLGFSSDSGGWWCGGSIIGHTWVITAAHCTHGAHSVTIYYGALWRLQ--------AQYTHTV 112
            |.|.:  .:..|...||||||...|::|||||..            |.:|        ..||.. 
  Fly    55 YQVSI--MNTFGEHVCGGSIIAPQWILTAAHCME------------WPIQYLKIVTGTVDYTRP- 104

  Fly   113 GSGHF----RQHSDYNTNNLNNDISLINTPHVDFW-------HLINKVELPDGNERHDSFAGWWA 166
            |:.:.    :.|..::....:|||:||:|.....:       .|.:|..||...::. :..||.:
  Fly   105 GAEYLVDGSKIHCSHDKPAYHNDIALIHTAKPIVYDDLTQPIKLASKGSLPKVGDKL-TLTGWGS 168

  Fly   167 LASGWGRPCDSCGVSDYLNCVDSQIITRDECSS-VYGTDVITDNVICTSTPGGKSTCAGDSGGPL 230
            ..: |||      .|..|..:|...|..|.|.| |...:.:::..:||.|..|:.:|.|||||||
  Fly   169 TKT-WGR------YSTQLQKIDLNYIDHDNCQSRVRNANWLSEGHVCTFTQEGEGSCHGDSGGPL 226

  Fly   231 VLHDRSKLVGVTSFVAASGCTSGLPDGFTRVTSYLDWI 268
            |..::: ||||.::  ...|..|.||.|..|..|.|||
  Fly   227 VDANQT-LVGVVNW--GEACAIGYPDVFGSVAYYHDWI 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon25BiiNP_608882.1 Tryp_SPc 42..268 CDD:214473 73/245 (30%)
CG5246NP_650603.1 Tryp_SPc 42..263 CDD:238113 74/246 (30%)

Return to query results.
Submit another query.