DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon25Bii and CG3088

DIOPT Version :10

Sequence 1:NP_608882.1 Gene:Jon25Bii / 33707 FlyBaseID:FBgn0031654 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_648334.1 Gene:CG3088 / 39115 FlyBaseID:FBgn0036015 Length:252 Species:Drosophila melanogaster


Alignment Length:277 Identity:118/277 - (42%)
Similarity:167/277 - (60%) Gaps:26/277 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLFLTVLAVA-IACAAAQPEKVKPVPLKDAVLGSGSGSIEGRITNGYPAYEGKVPYIVGLGFSS 64
            |||.:..|.:. :|..:|:.:...|    |.:           ||||.|||||:.||:||:.|..
  Fly     1 MKLLVVFLGLTLVAAGSAKKDSEDP----DHI-----------ITNGSPAYEGQAPYVVGMAFGQ 50

  Fly    65 DSGGWWCGGSIIGHTWVITAAHCTHGAHSVTIYYGALWRLQAQYTHTVGSGHFRQHSDYNTNNLN 129
            .:  .||.|:|||.||::|:|.|..|:..||||:||....|||:|.|||:      |:|.|.  |
  Fly    51 SN--IWCSGTIIGDTWILTSAQCLTGSSGVTIYFGATRLSQAQFTVTVGT------SEYVTG--N 105

  Fly   130 NDISLINTPHVDFWHLINKVELPDGNERHDSFAGWWALASGWGRPCDSCGVSDYLNCVDSQIITR 194
            ..::|:..|.|.|.:.:|:|.||....|...:..|||...|||....|.|::|.|.|||.||::.
  Fly   106 QHLALVRVPRVGFSNRVNRVALPSLRNRSQRYENWWANVCGWGVTTFSNGLTDALQCVDLQIMSN 170

  Fly   195 DECSSVYGTDVITDNVICTSTPGGKSTCAGDSGGPLVLHDRSKLVGVTSFVAASGCTSGLPDGFT 259
            :||.:.||:..::|.::||.||.|:|||.||:|.||:....|.:||:::|||::|||.|||.||.
  Fly   171 NECIAFYGSTTVSDQILCTRTPSGRSTCFGDAGSPLITKQDSTVVGISAFVASNGCTLGLPAGFA 235

  Fly   260 RVTSYLDWIRDHTGISY 276
            |:||.||||...|||:|
  Fly   236 RITSALDWIHQRTGIAY 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon25BiiNP_608882.1 Tryp_SPc 42..268 CDD:214473 104/225 (46%)
CG3088NP_648334.1 Tryp_SPc 29..244 CDD:214473 104/224 (46%)

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