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Protein Alignment Jon25Bii and Tmprss11a

DIOPT Version :10

Sequence 1:	NP_608882.1	Gene:	Jon25Bii / 33707	FlyBaseID:	FBgn0031654	Length:	276	Species:	Drosophila melanogaster
Sequence 2:	XP_006534903.1	Gene:	Tmprss11a / 194597	MGIID:	2684853	Length:	392	Species:	Mus musculus

Alignment Length:	290	Identity:	88/290 - (30%)
Similarity:	122/290 - (42%)	Gaps:	61/290 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly    15 AAAQPEKVKPVPLKDAVLGSGSGS---IEGRITNGYPAYEGKVPYIVGLGFSSDSGGWWCGGSII 76
            |.|.|..|..|.:||.    |..:   |..||.:|.||.:|..|:.|.|   ..|....|||::|
Mouse   134 ARALPADVSLVQVKDC----GKRAIPLIANRIVSGNPAAKGAWPWQVSL---QRSNIHQCGGTLI 191

  Fly    77 GHTWVITAAHC---THGAHSVTIYYGALWRLQAQYTHTVGSGHFRQ-------HSDYNTNNLNND 131
            |:.||:|||||   .......|:.:|.          |:.....::       |..|.....::|
Mouse   192 GNMWVVTAAHCFRTNSNPRQWTLSFGT----------TINPPLMKRDVRRIIMHERYRPPARDHD 246

  Fly   132 ISLIN-TPHVDFWHLINKVELPDGNERHDSF--------AGWWALASGWGRPCDSCGVS-DYLNC 186
            |:|:. :|.|.|...:.::.||   |...||        .|:.||..|        |.| :.|..
Mouse   247 IALVQFSPRVTFSDEVRRICLP---EPSASFPPNSTVYITGFGALYYG--------GESQNELRE 300

  Fly   187 VDSQIITRDECSS--VYGTDVITDNVICTS-TPGGKSTCAGDSGGPLVLHDRSK---LVGVTSFV 245
            ...|||:.|.|..  |||.: |...:.|.. ..|....|.||||||||:.|...   |:|:.|:
Mouse   301 ARVQIISNDICKKRHVYGNE-IKRGMFCAGFLEGNYDACRGDSGGPLVIRDNKDTWYLIGIVSW- 363

  Fly   246 AASGC-TSGLPDGFTRVTSYLDWIRDHTGI 274
             ...| ....|..:|:||.|..||...||:
Mouse   364 -GDNCGQKNKPGVYTQVTYYRHWIASKTGL 392

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.