DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon25Bii and Gzmb

DIOPT Version :10

Sequence 1:NP_608882.1 Gene:Jon25Bii / 33707 FlyBaseID:FBgn0031654 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_612526.2 Gene:Gzmb / 171528 RGDID:620018 Length:248 Species:Rattus norvegicus


Alignment Length:279 Identity:76/279 - (27%)
Similarity:114/279 - (40%) Gaps:47/279 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLFLTVLAVAIACAAAQPEKVKPVPLKDAVLGSGSGSIEGRITNGYPAYEGKVPYIVGLGFSSD 65
            |||.|.:|:.::|            |..:|          |.|..|:.|.....||:..|....:
  Rat     1 MKLLLLLLSFSLA------------PKTEA----------GEIIGGHEAKPHSRPYMAYLQIMDE 43

  Fly    66 -SGGWWCGGSIIGHTWVITAAHC-------THGAHSVTIYYGALWRLQAQYTHTVGSGHFRQHSD 122
             ||...|||.:|...:|:|||||       |.|||::        :.|.:....:.......|..
  Rat    44 YSGSKKCGGFLIREDFVLTAAHCSGSKINVTLGAHNI--------KEQEKMQQIIPVVKIIPHPA 100

  Fly   123 YNTNNLNNDISLIN-TPHVDFWHLINKVELPDGNERHDSFAGWWALASGWGRPCDSCGVSDYLNC 186
            ||:..::|||.|:. .........:..:.||..|.:..  .|.....:|||:.......||.|..
  Rat   101 YNSKTISNDIMLLKLKSKAKRSSAVKPLNLPRRNVKVK--PGDVCYVAGWGKLGPMGKYSDTLQE 163

  Fly   187 VDSQIITRDECSSVYGTDVITDNVICTSTPGGK-STCAGDSGGPLVLHDRSKLVGVTSFVAASGC 250
            |:..:....:|.|.........|.||...|..| ::..||||||||.  :....|:.|:....|.
  Rat   164 VELTVQEDQKCESYLKNYFDKANEICAGDPKIKRASFRGDSGGPLVC--KKVAAGIVSYGQNDGS 226

  Fly   251 TSGLPDGFTRVTSYLDWIR 269
            |   |..||:|:::|.||:
  Rat   227 T---PRAFTKVSTFLSWIK 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon25BiiNP_608882.1 Tryp_SPc 42..268 CDD:214473 65/235 (28%)
GzmbNP_612526.2 Tryp_SPc 21..244 CDD:238113 67/237 (28%)

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