DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon25Bii and Gzmc

DIOPT Version :10

Sequence 1:NP_608882.1 Gene:Jon25Bii / 33707 FlyBaseID:FBgn0031654 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_599159.1 Gene:Gzmc / 171290 RGDID:620019 Length:248 Species:Rattus norvegicus


Alignment Length:230 Identity:63/230 - (27%)
Similarity:95/230 - (41%) Gaps:35/230 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 PYIVGLGFSSDSG-GWWCGGSIIGHTWVITAAHC-------THGAHSVTIYYGALWRLQAQYTHT 111
            ||:....|.:|:| ..:|||.::...:|:|||||       |.|||::        :.:.:....
  Rat    33 PYMAYFEFLNDNGKKTFCGGFLVRDNFVLTAAHCRGRSMTVTLGAHNI--------KAKEKTQQI 89

  Fly   112 VGSGHFRQHSDYNTNNLNNDISLIN-TPHVDFWHLINKVELPDGNERHDSFAGWWALASGWGRPC 175
            :...:...|..||.:..:|||.|:. .........:..:.||..|....  .|.....:|||:..
  Rat    90 IPVANATPHPAYNPDKRSNDIMLLKLVRSAKRTSAVRPLNLPRRNAHVK--PGDVCYMAGWGKIT 152

  Fly   176 DSCGVSDYLNCVDSQIITRDECSSVYGTDVITDNVICTSTPGGKSTCAG-----DSGGPLVLHDR 235
            ......:.|..|:..:.....|.|.:....|..:.||.    |.|...|     |||||||.  :
  Rat   153 PQGEFPNTLREVELTVQKDRVCESQFQRSYIKASEICV----GDSKTKGASFEEDSGGPLVC--K 211

  Fly   236 SKLVGVTSFVAASGCTSG-LPDGFTRVTSYLDWIR 269
            ....|:.|:    |.|.| .|..||||.|:|.||:
  Rat   212 KAAAGIVSY----GKTDGSAPQVFTRVLSFLSWIK 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon25BiiNP_608882.1 Tryp_SPc 42..268 CDD:214473 61/227 (27%)
GzmcNP_599159.1 Tryp_SPc 21..244 CDD:238113 63/230 (27%)

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