DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon25Bii and CG43110

DIOPT Version :10

Sequence 1:NP_608882.1 Gene:Jon25Bii / 33707 FlyBaseID:FBgn0031654 Length:276 Species:Drosophila melanogaster
Sequence 2:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster


Alignment Length:296 Identity:77/296 - (26%)
Similarity:119/296 - (40%) Gaps:75/296 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LFLTVLAVAI-ACAAA------QPEKVKPVPLKDAVLGSGSGSIEGRITNGYPAYEGKVPYIVGL 60
            ||:.:...:: :|..|      ||....|||               :|.:|..|.:....|:.|:
  Fly     4 LFVWIFLCSLGSCQLAYSMFLKQPCGKTPVP---------------KIISGSNASQQSAQYMAGI 53

  Fly    61 GFSSDSGGWWCGGSIIGHTWVITAAHCTHGAHSVTIYYGALWRL-----QAQYTHTVGSGHFRQH 120
             |::..  ..|||:||...:|:|.||| ....::.:..|| :.:     |.:...|:.      |
  Fly    54 -FNTTH--LLCGGTIIHEDFVLTVAHC-KSTQTLFVRLGA-YNINHPTDQIRVIETIA------H 107

  Fly   121 SDYNTNNLNNDISLINTPHVDFWHL-INKVELPDGNERH-DSFAG---WWALASGWGRPCDSCGV 180
            ..|:.:...|||:|:.......::| |..:.:      | |:..|   .:..|.|||| ..:...
  Fly   108 PQYSNSTYANDIALVKLERSVIFNLNIQPICI------HLDATLGKQIRYYNAFGWGR-TRNAEQ 165

  Fly   181 SDYLNCVDSQIITRDE---CSSVYGTDVITDNVICTSTPGGKSTCAGDSGGPLVLHDRSKLV--- 239
            ||.|..:   .:.|..   |....|... ....||.:|..| .||||||||||:    ||:.   
  Fly   166 SDILQRI---FVNRTNPMICHLYLGMSP-DPKQICATTDQG-DTCAGDSGGPLI----SKITYQG 221

  Fly   240 -------GVTSFVAASGCTSGLPDGFTRVTSYLDWI 268
                   |:||:........||   :|.|:.|..||
  Fly   222 KNFDTQFGITSYGTRECNGVGL---YTDVSQYSGWI 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon25BiiNP_608882.1 Tryp_SPc 42..268 CDD:214473 66/248 (27%)
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 68/249 (27%)

Return to query results.
Submit another query.