DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon25Biii and CG8870

DIOPT Version :10

Sequence 1:NP_608881.1 Gene:Jon25Biii / 33706 FlyBaseID:FBgn0031653 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_731802.1 Gene:CG8870 / 41645 FlyBaseID:FBgn0038144 Length:356 Species:Drosophila melanogaster


Alignment Length:239 Identity:57/239 - (23%)
Similarity:87/239 - (36%) Gaps:66/239 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 CGGSIIAHDWVLTAEHCIGDAASVIVYFGATWRTNAQFTHT-----VGNG--------------N 107
            ||||:|.:.:||||.||:........|...|.|.....|.|     :.||              .
  Fly   117 CGGSLINNWYVLTAAHCVEYPFMDYPYALKTVRLGEHNTSTNPDRAIVNGRRQYAPLYMEIEVDQ 181

  Fly   108 FIKHSN--------ADIALIRIPH-VDFWHMVNKVELP------SYNDRYNNYNEWWAVACGWGG 157
            .|.|..        .||||:|:.. |.:...:..:.||      ::..::.        |.||  
  Fly   182 IITHEQFNRGRRLINDIALVRLKFPVRYTRAIQPICLPRAQKLAAHKRKFQ--------ASGW-- 236

  Fly   158 TYDGSPLPDWLQCVDLQIV--------HNEECGWTYGSVGDNVICTRTVDGKSICGGDSGGPL-- 212
                   ||..|.:..:::        |.:.|...|.....:.||...:||.....|||||||  
  Fly   237 -------PDMGQGIASEVLLRSFIAERHPDVCKSNYDFNLGSQICAGGLDGNDTSPGDSGGPLME 294

  Fly   213 -VTHDGSKLVGVSNFVS--SNGC--QSGAPAGFQRVTYHLDWIR 251
             |......|...:..:|  ...|  ::..||.:.:.:|..:||:
  Fly   295 TVIRGKVTLTYAAGIISYGQKPCVLKTCKPAFYTKTSYFFEWIK 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon25BiiiNP_608881.1 Tryp_SPc 37..253 CDD:238113 57/239 (24%)
CG8870NP_731802.1 Tryp_SPc 93..340 CDD:238113 57/239 (24%)

Return to query results.
Submit another query.