DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon25Biii and Ctrl

DIOPT Version :9

Sequence 1:NP_608881.1 Gene:Jon25Biii / 33706 FlyBaseID:FBgn0031653 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_446461.1 Gene:Ctrl / 117184 RGDID:621501 Length:264 Species:Rattus norvegicus


Alignment Length:249 Identity:82/249 - (32%)
Similarity:116/249 - (46%) Gaps:34/249 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 VKDLPKATKIEGRITNGYAAPEGKAPYTVGLGFSGGW-WCGGSIIAHDWVLTAEHCIGDAASVIV 87
            |..:..|.....||.||..|..|..|:.|.|..:.|: :||||:||.:||:||.||........|
  Rat    21 VPAITPALSYNQRIVNGENAVPGSWPWQVSLQDNTGFHFCGGSLIAPNWVVTAAHCKVTPGRHFV 85

  Fly    88 YFGATWR-TNAQ----------FTHTVGNGNFIKHSNADIALIRIPH-VDFWHMVNKVELPSYND 140
            ..|...| :||:          .||...|.|.:   |.|:.|:::.. ..:...|:.|.|.|.|:
  Rat    86 ILGEYDRSSNAEPIQVLSISKAITHPSWNPNTM---NNDLTLLKLASPARYTAQVSPVCLASSNE 147

  Fly   141 RYNNYNEWWAVAC---GWG---GTYDGSPLPDWLQCVDLQIVHNEECGWTYGS-VGDNVICTRTV 198
            ....     .:.|   |||   |.  |:..|..||.|.|.:|...:|...:|| :.|::||....
  Rat   148 ALPA-----GLTCVTTGWGRISGV--GNVTPARLQQVVLPLVTVNQCRQYWGSRITDSMICAGGA 205

  Fly   199 DGKSICGGDSGGPLVTHDGSK--LVGVSNFVSSNGCQSGAPAGFQRVTYHLDWI 250
             |.|.|.||||||||...|:.  |:|:.::.:.| |...|||.:.||:....||
  Rat   206 -GASSCQGDSGGPLVCQKGNTWVLIGIVSWGTEN-CNVQAPAMYTRVSKFNTWI 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon25BiiiNP_608881.1 Tryp_SPc 36..250 CDD:214473 78/235 (33%)
Tryp_SPc 37..253 CDD:238113 79/236 (33%)
CtrlNP_446461.1 Tryp_SPc 33..257 CDD:214473 78/235 (33%)
Tryp_SPc 34..260 CDD:238113 79/236 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1522379at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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