DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jet and AT1G80570

DIOPT Version :9

Sequence 1:NP_608880.2 Gene:jet / 33705 FlyBaseID:FBgn0031652 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_974191.1 Gene:AT1G80570 / 844396 AraportID:AT1G80570 Length:480 Species:Arabidopsis thaliana


Alignment Length:246 Identity:66/246 - (26%)
Similarity:96/246 - (39%) Gaps:63/246 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 DVAFRVLARCCQRLEVLHLACCRWLTDELLLPLLANNKKRLWAVNLNECVNITALSLQPIIVECK 162
            |....||...|..|..|.|:.|.::||..:..|  ::...|.::.||....||...:..:.|.||
plant    99 DQGLLVLTTNCHSLTDLTLSFCTFITDVGIGHL--SSCPELSSLKLNFAPRITGCGVLSLAVGCK 161

  Fly   163 ELRVLKLSKC------QWLT-TGAVDALTLHQSKLVEFDISYCGAIGERCLIIFFRKLNKLTVLS 220
            :||.|.|.:|      :||. .|.::.|.       |..|..|.||||..||.......|||.|.
plant   162 KLRRLHLIRCLNVASVEWLEYFGKLETLE-------ELCIKNCRAIGEGDLIKLRNSWRKLTSLQ 219

  Fly   221 L---AN--TPSVTDQ----------------VLIQIGN--------------YCRELEHINVIGC 250
            .   ||  ...|.||                |.:.:||              .|:.||.:::..|
plant   220 FEVDANYRYMKVYDQLDVERWPKQLVPCDSLVELSLGNCIIAPGRGLACVLRNCKNLEKLHLDMC 284

  Fly   251 AAISDYGVHALTVHCLRLRTLLIR-----RCP-------RVTELSLAPLRQ 289
            ..:||..:.||......||::.:|     ..|       |:|:.||:.:.|
plant   285 TGVSDSDIIALVQKASHLRSISLRVPSDFTLPLLNNITLRLTDESLSAIAQ 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jetNP_608880.2 leucine-rich repeat 85..110 CDD:275381 4/11 (36%)
AMN1 96..>261 CDD:187754 55/204 (27%)
leucine-rich repeat 111..137 CDD:275381 7/25 (28%)
leucine-rich repeat 138..163 CDD:275381 7/24 (29%)
leucine-rich repeat 164..189 CDD:275381 9/31 (29%)
leucine-rich repeat 190..215 CDD:275381 9/24 (38%)
leucine-rich repeat 216..241 CDD:275381 12/59 (20%)
leucine-rich repeat 242..267 CDD:275381 7/24 (29%)
leucine-rich repeat 268..290 CDD:275381 9/34 (26%)
AT1G80570NP_974191.1 AMN1 77..309 CDD:187754 59/218 (27%)
leucine-rich repeat 79..111 CDD:275381 4/11 (36%)
leucine-rich repeat 112..136 CDD:275381 7/25 (28%)
leucine-rich repeat 137..162 CDD:275381 7/24 (29%)
leucine-rich repeat 163..188 CDD:275381 8/24 (33%)
leucine-rich repeat 189..226 CDD:275381 15/43 (35%)
AMN1 241..435 CDD:187754 20/95 (21%)
leucine-rich repeat 250..275 CDD:275381 4/24 (17%)
leucine-rich repeat 276..301 CDD:275381 7/24 (29%)
leucine-rich repeat 302..339 CDD:275381 9/34 (26%)
leucine-rich repeat 340..368 CDD:275381
leucine-rich repeat 372..396 CDD:275381
leucine-rich repeat 397..421 CDD:275381
leucine-rich repeat 422..446 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.