DRSC/TRiP Functional Genomics Resources

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Protein Alignment jet and EBF2

DIOPT Version :9

Sequence 1:NP_608880.2 Gene:jet / 33705 FlyBaseID:FBgn0031652 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_197917.1 Gene:EBF2 / 832607 AraportID:AT5G25350 Length:623 Species:Arabidopsis thaliana


Alignment Length:215 Identity:56/215 - (26%)
Similarity:92/215 - (42%) Gaps:29/215 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 DVAFRVLARCCQRLEVLHLACCRWLTDELLLPLLANNKKRLWAVNLNECVNITALSLQPIIVECK 162
            |:....:||.|..:|.|.|:.|..:||..|: .:|.|...|..:.::.|..:....|:.|...|.
plant   182 DLGLSEIARSCPMIEKLDLSRCPGITDSGLV-AIAENCVNLSDLTIDSCSGVGNEGLRAIARRCV 245

  Fly   163 ELRVLKLSKC--------QWLTTGAVDALT------LHQSKLVEFDISYCGA------------I 201
            .||.:.:..|        .:|...|...||      |:.|.|....|.:.||            :
plant   246 NLRSISIRSCPRIGDQGVAFLLAQAGSYLTKVKLQMLNVSGLSLAVIGHYGAAVTDLVLHGLQGV 310

  Fly   202 GERCLIIF--FRKLNKLTVLSLANTPSVTDQVLIQIGNYCRELEHINVIGCAAISDYGVHALTVH 264
            .|:...:.  .:.|.||..||:.:...:||..|..:||.|.:|:|:::..|..:|..|:.||...
plant   311 NEKGFWVMGNAKGLKKLKSLSVMSCRGMTDVGLEAVGNGCPDLKHVSLNKCLLVSGKGLVALAKS 375

  Fly   265 CLRLRTLLIRRCPRVTELSL 284
            .|.|.:|.:..|.|:.:..|
plant   376 ALS
LESLKLEECHRINQFGL 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jetNP_608880.2 leucine-rich repeat 85..110 CDD:275381 4/11 (36%)
AMN1 96..>261 CDD:187754 48/190 (25%)
leucine-rich repeat 111..137 CDD:275381 9/25 (36%)
leucine-rich repeat 138..163 CDD:275381 5/24 (21%)
leucine-rich repeat 164..189 CDD:275381 8/38 (21%)
leucine-rich repeat 190..215 CDD:275381 6/38 (16%)
leucine-rich repeat 216..241 CDD:275381 9/24 (38%)
leucine-rich repeat 242..267 CDD:275381 7/24 (29%)
leucine-rich repeat 268..290 CDD:275381 5/17 (29%)
EBF2NP_197917.1 F-box 54..>92 CDD:279040
AMN1 <138..268 CDD:187754 22/86 (26%)
leucine-rich repeat 169..194 CDD:275381 4/11 (36%)
leucine-rich repeat 195..220 CDD:275381 9/25 (36%)
leucine-rich repeat 221..246 CDD:275381 5/24 (21%)
leucine-rich repeat 247..278 CDD:275381 7/30 (23%)
leucine-rich repeat 279..326 CDD:275381 8/46 (17%)
leucine-rich repeat 327..352 CDD:275381 9/24 (38%)
leucine-rich repeat 353..378 CDD:275381 7/24 (29%)
leucine-rich repeat 379..402 CDD:275381 5/17 (29%)
leucine-rich repeat 406..459 CDD:275381
leucine-rich repeat 407..433 CDD:275381
AMN1 435..>582 CDD:187754
leucine-rich repeat 460..511 CDD:275381
leucine-rich repeat 487..512 CDD:275381
leucine-rich repeat 514..537 CDD:275381
leucine-rich repeat 540..566 CDD:275381
leucine-rich repeat 567..595 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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