DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment jet and VFB3

DIOPT Version :9

Sequence 1:	NP_608880.2	Gene:	jet / 33705	FlyBaseID:	FBgn0031652	Length:	319	Species:	Drosophila melanogaster
Sequence 2:	NP_567316.1	Gene:	VFB3 / 826171	AraportID:	AT4G07400	Length:	554	Species:	Arabidopsis thaliana

Alignment Length:	269	Identity:	71/269 - (26%)
Similarity:	100/269 - (37%)	Gaps:	93/269 - (34%)

- Green bases have known domain annotations that are detailed below.

  Fly    58 LSLKDLFNLRC------------------CSRTAQRFVEAALEKRQ---ELHLSGNNTKNIDVAF 101
            :.||:|.|.:|                  ||....|..||..:|..   |:||  ...:..|:..
plant   247 ICLKELHNGQCFAPLLSGAKGLRILKIFRCSGDWDRVFEAVRDKVNAIVEIHL--ERIQMSDLGL 309

  Fly   102 RVLARCCQRLEVLHLA----C-----------CR---------WLT----DELLLPLLANNKKRL 138
            ..|:: |..:|||||.    |           |:         |.|    ||.|:.:    .|..
plant   310 TALSK-CSGVEVLHLVKTPDCTNVGLALVAERCKLLRKLHIDGWKTNRIGDEGLIVV----AKYC 369

  Fly   139 WAVNLNEC----VNITALSLQPIIVECKELRVLKLSKCQWLTTGAVDALTLHQSKLVEFDISYCG 199
            |  ||.|.    ||.|.|||:.|:..|  |.:.:|:.|...|.|               |...|
plant   370 W--NLQELVLIGVNPTKLSLEAIVSNC--LNLERLALCGSDTVG---------------DTELC- 414

  Fly   200 AIGERCLIIFFRKLNKLTVLSLANTPSVTDQVLIQIGNYCRELEHINVIGCAAISDYGVHALTVH 264
            .|.|:||.:  ||      |.:.|.| :||..:..:||.|..|..:.|..|..::..|...|.
plant   415 CIAEKCLAL--RK------LCIKNCP-ITDDGIKALGNGCPNLLKVKVKKCRGVTTQGADLLR-- 468

  Fly   265 CLRLRTLLI 273
              :.|.||:
plant   469 --KRRALLV 475

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
jet	NP_608880.2	leucine-rich repeat	85..110	CDD:275381	6/27 (22%)
		AMN1	96..>261	CDD:187754	53/196 (27%)
		leucine-rich repeat	111..137	CDD:275381	12/53 (23%)
		leucine-rich repeat	138..163	CDD:275381	12/28 (43%)
		leucine-rich repeat	164..189	CDD:275381	5/24 (21%)
		leucine-rich repeat	190..215	CDD:275381	8/24 (33%)
		leucine-rich repeat	216..241	CDD:275381	8/24 (33%)
		leucine-rich repeat	242..267	CDD:275381	5/24 (21%)
		leucine-rich repeat	268..290	CDD:275381	3/6 (50%)
VFB3	NP_567316.1	F-box-like	74..>104	CDD:289689
		leucine-rich repeat	89..114	CDD:275381
		leucine-rich repeat	115..165	CDD:275381
		AMN1	<146..>226	CDD:187754
		leucine-rich repeat	166..191	CDD:275381
		leucine-rich repeat	192..216	CDD:275381
		leucine-rich repeat	268..293	CDD:275381	6/24 (25%)
		leucine-rich repeat	294..317	CDD:275381	6/25 (24%)
		leucine-rich repeat	318..343	CDD:275381	7/24 (29%)
		AMN1	<340..>463	CDD:187754	43/155 (28%)
		leucine-rich repeat	344..371	CDD:275381	7/32 (22%)
		leucine-rich repeat	372..396	CDD:275381	10/25 (40%)
		leucine-rich repeat	397..422	CDD:275381	9/40 (23%)
		leucine-rich repeat	423..447	CDD:275381	10/32 (31%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1947
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900