DRSC/TRiP Functional Genomics Resources

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Protein Alignment jet and Fbxl22

DIOPT Version :9

Sequence 1:NP_608880.2 Gene:jet / 33705 FlyBaseID:FBgn0031652 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_780415.1 Gene:Fbxl22 / 74165 MGIID:1921415 Length:236 Species:Mus musculus


Alignment Length:75 Identity:24/75 - (32%)
Similarity:40/75 - (53%) Gaps:5/75 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 SVTDQVLIQIGNYCRELEHINVIGCAAISDYGVHALTVHCLRLRTLLIRRCPRVTELSLAPLRQ- 289
            |:.:..|:|:.|.|..|..:.:.||..::|..:..|.:.|.|||||.:..|.|||..:||.:.. 
Mouse   100 SLVNDFLLQVCNRCPNLTSVTLSGCGHVTDDCLARLLLSCPRLRTLRLENCARVTNRTLAAVAAH 164

  Fly   290 ----RRLYID 295
                :.|::|
Mouse   165 GRALQTLHVD 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jetNP_608880.2 leucine-rich repeat 85..110 CDD:275381
AMN1 96..>261 CDD:187754 9/34 (26%)
leucine-rich repeat 111..137 CDD:275381
leucine-rich repeat 138..163 CDD:275381
leucine-rich repeat 164..189 CDD:275381
leucine-rich repeat 190..215 CDD:275381
leucine-rich repeat 216..241 CDD:275381 5/14 (36%)
leucine-rich repeat 242..267 CDD:275381 6/24 (25%)
leucine-rich repeat 268..290 CDD:275381 10/26 (38%)
Fbxl22NP_780415.1 F-box-like 3..43 CDD:403981
LRR 1 15..40
LRR 2 43..72
AMN1 45..>200 CDD:187754 24/75 (32%)
LRR 3 98..123 6/22 (27%)
leucine-rich repeat 116..141 CDD:275381 6/24 (25%)
LRR 4 124..149 9/24 (38%)
leucine-rich repeat 142..167 CDD:275381 10/24 (42%)
LRR 5 150..175 8/25 (32%)
leucine-rich repeat 168..193 CDD:275381 2/7 (29%)
LRR 6 176..201
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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