DRSC/TRiP Functional Genomics Resources

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Protein Alignment jet and fbxl18

DIOPT Version :10

Sequence 1:NP_608880.2 Gene:jet / 33705 FlyBaseID:FBgn0031652 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001025416.2 Gene:fbxl18 / 570298 ZFINID:ZDB-GENE-050913-65 Length:721 Species:Danio rerio


Alignment Length:398 Identity:77/398 - (19%)
Similarity:122/398 - (30%) Gaps:175/398 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PEEEAHLMAMASGGQPTRTASPRPL---------------VTASIAAPRSLFDVCWDD------V 49
            ||..|.|:....|..|     |||:               ..:::..||:     |.|      |
Zfish   252 PEGLAGLVLSVPGPAP-----PRPVAMTALMESMASTVGNTVSALQLPRT-----WLDGAILGRV 306

  Fly    50 LIPQVAVYLSL------------------KDL-----FNLRCCSRTAQRFVEAALEKRQELHLSG 91
            |......||::                  :||     .|||.|.|       ..|.:.     .|
Zfish   307 LAHGCPAYLNVSRCSSPGFNPLHVLLSAGRDLTPLRSLNLRGCGR-------GPLSES-----CG 359

  Fly    92 NNTKNIDV-AFRVLARCCQRLEVLHLACCRW------------------LTD--ELLLPLLA--- 132
            ...:.:|. :.:.||.||..|..|:|:...:                  ||.  .|.||:.|   
Zfish   360 KGDEEMDTDSVKALAECCPHLNHLNLSATHYHHNLSTGQDGHLCGTLGRLTGLCSLALPVCALAQ 424

  Fly   133 ------NNK-------KRLWAVNLNECVNI---------------------TALSLQPIIVECKE 163
                  ||:       .|...:.|.:...|                     ..|.:||::..|..
Zfish   425 SPPTQINNQDSNTDLASRSLLLGLKKTTRIGVPTYRPTSEIAVGQGEERTDRGLCIQPLLQGCPY 489

  Fly   164 LRVLKL--------------------SKCQWLTTGAVDALTLHQSKLVEFDISYCGAIGERCLII 208
            |..|:|                    :.|.|                     ||....||...:.
Zfish   490 LVELELIGAGFSSAMPRNEPAIRKDPAACSW---------------------SYSVGDGELAALG 533

  Fly   209 FFRKLNKLTVLSLANTPSVTDQV-LIQIGNYCRELEHINV--IGCAAISDYG---VHALTVHCLR 267
            ..:.|.|||   ||:.|.|.... ||::...|::|..:::  :|.....:|.   :.||: :|.:
Zfish   534 GMKFLRKLT---LAHLPGVLKGTGLIELLQGCKDLHSLSLANLGSLKTMNYTQALLEALS-YCTQ 594

  Fly   268 LRTLLIRR 275
            :|.|.:.:
Zfish   595 VRDLRLEQ 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jetNP_608880.2 F-box_FBXL15 41..84 CDD:438898 14/71 (20%)
leucine-rich repeat 85..110 CDD:275381 6/25 (24%)
AMN1 96..>261 CDD:187754 46/248 (19%)
leucine-rich repeat 111..137 CDD:275381 11/61 (18%)
leucine-rich repeat 138..163 CDD:275381 6/45 (13%)
leucine-rich repeat 164..189 CDD:275381 5/44 (11%)
leucine-rich repeat 190..215 CDD:275381 5/24 (21%)
leucine-rich repeat 216..241 CDD:275381 9/25 (36%)
leucine-rich repeat 242..267 CDD:275381 6/29 (21%)
leucine-rich repeat 268..290 CDD:275381 2/8 (25%)
fbxl18NP_001025416.2 F-box_FBXL18 22..65 CDD:438900
FBXL18_LRR 79..680 CDD:466163 77/398 (19%)
leucine-rich repeat 291..313 CDD:275381 6/26 (23%)
leucine-rich repeat 314..337 CDD:275381 2/22 (9%)
leucine-rich repeat 338..379 CDD:275381 13/52 (25%)
leucine-rich repeat 380..450 CDD:275381 13/69 (19%)
leucine-rich repeat 451..489 CDD:275381 5/37 (14%)
leucine-rich repeat 490..537 CDD:275381 9/67 (13%)
leucine-rich repeat 538..564 CDD:275381 11/28 (39%)
leucine-rich repeat 595..620 CDD:275381 2/8 (25%)
Blue background indicates that the domain is not in the aligned region.

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