DRSC/TRiP Functional Genomics Resources

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Protein Alignment jet and CG12402

DIOPT Version :9

Sequence 1:NP_608880.2 Gene:jet / 33705 FlyBaseID:FBgn0031652 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001303481.1 Gene:CG12402 / 41714 FlyBaseID:FBgn0038202 Length:671 Species:Drosophila melanogaster


Alignment Length:215 Identity:59/215 - (27%)
Similarity:100/215 - (46%) Gaps:21/215 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 LHLSG---NNTKNIDVAF--RVLARCCQ-------RLEVLHLACCRWLTDELLLPLLANN-KKRL 138
            |:::|   :..|.:|:.|  ::.|.|..       |||.|.:|.||.||...||..||.: ...|
  Fly   348 LYVAGKWQSTLKVLDLMFCVQLNANCIDALRQLSGRLEALTMAYCRELTGTGLLQGLAGDINYSL 412

  Fly   139 WAVNLNECVNITALSLQPIIVECKELRVLKLSKC-QWLTTGAVDALTLHQSKLVEFDISYCGAIG 202
            ..::|.|.:.:...|:..::.....||.|.|..| |.:|...:..:..:|::|...:|.||..|.
  Fly   413 QELHLEETIFLDESSMCQLLERLPNLRRLSLDNCRQAVTDRTMATICQYQTRLRNLNIEYCMKIT 477

  Fly   203 ERCLIIF------FRKLNKLTVLSLANTPSVTDQVLIQIGNYCRELEHINVIGCAAISDYGVHAL 261
            ::.|:.:      ..:|..|..|:|....:|||..|: :|....||..:::..|..::..|..||
  Fly   478 DQGLMGYGDTPYPISRLRGLKELNLRGCRNVTDSSLM-VGLKLPELRALSLGYCNRLTSEGFEAL 541

  Fly   262 TVHCLRLRTLLIRRCPRVTE 281
            |.:|..|..|.:..|..|.:
  Fly   542 TQNCPSLEALCVSSCMAVDD 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jetNP_608880.2 leucine-rich repeat 85..110 CDD:275381 7/34 (21%)
AMN1 96..>261 CDD:187754 48/181 (27%)
leucine-rich repeat 111..137 CDD:275381 12/26 (46%)
leucine-rich repeat 138..163 CDD:275381 4/24 (17%)
leucine-rich repeat 164..189 CDD:275381 8/25 (32%)
leucine-rich repeat 190..215 CDD:275381 7/30 (23%)
leucine-rich repeat 216..241 CDD:275381 8/24 (33%)
leucine-rich repeat 242..267 CDD:275381 7/24 (29%)
leucine-rich repeat 268..290 CDD:275381 4/14 (29%)
CG12402NP_001303481.1 F-box 75..117 CDD:279040
leucine-rich repeat 281..303 CDD:275381
LRR_RI <297..482 CDD:238064 37/133 (28%)
leucine-rich repeat 304..330 CDD:275381
leucine-rich repeat 331..357 CDD:275381 2/8 (25%)
leucine-rich repeat 358..379 CDD:275381 5/20 (25%)
leucine-rich repeat 384..409 CDD:275381 12/24 (50%)
leucine-rich repeat 412..437 CDD:275381 4/24 (17%)
AMN1 430..595 CDD:187754 35/133 (26%)
leucine-rich repeat 438..464 CDD:275381 8/25 (32%)
leucine-rich repeat 465..496 CDD:275381 7/30 (23%)
leucine-rich repeat 497..521 CDD:275381 8/24 (33%)
leucine-rich repeat 522..547 CDD:275381 7/24 (29%)
leucine-rich repeat 548..573 CDD:275381 4/14 (29%)
leucine-rich repeat 574..599 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457958
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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