DRSC/TRiP Functional Genomics Resources

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Protein Alignment jet and fbxl6

DIOPT Version :10

Sequence 1:NP_608880.2 Gene:jet / 33705 FlyBaseID:FBgn0031652 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001296447.1 Gene:fbxl6 / 323163 ZFINID:ZDB-GENE-060810-162 Length:564 Species:Danio rerio


Alignment Length:287 Identity:59/287 - (20%)
Similarity:100/287 - (34%) Gaps:98/287 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 ASPRPLVTASIAAPRSLFDVCW----------DDVLIPQVAVYLSLKDLFNLRCCSRTAQRFVEA 79
            |:..|::..|::     ...||          .:..|.....:|:...||.||          |.
Zfish   183 AASSPILWRSVS-----IGYCWIEPGKSQLPGTEQKIKNTVDWLAENRLFQLR----------EF 232

  Fly    80 ALEKRQELHLSGNNTKNIDVAFRVLARCCQRLEVLHLACCRWLTDELLLPLLANNKKRLWAVNLN 144
            :|     .|..    ||:|...:.:::.|..|..|.|:.|..:|::....|.|            
Zfish   233 SL-----CHWK----KNVDYVIQKVSQSCLSLHSLKLSYCTGMTEKAFQNLGA------------ 276

  Fly   145 ECVNITALSLQPIIVECKELRVLKLSKCQWLTTGAVDALTLHQSKLVEFDISYCGAIGERCLIIF 209
            :|     .||:.|.|:..|:.              ||.|           :|:..|.|.:...|:
Zfish   277 DC-----QSLEDINVQHSEIN--------------VDGL-----------VSFLEAYGNQIKKIY 311

  Fly   210 FRKLNK----LTVLSLANTPSVTDQVLIQI-----GNY-----CRELEHINVIGCAAISDYGVHA 260
            |....|    |:.||....|.:.   |::|     |.|     |  ::.:. |||..:..:.:..
Zfish   312 FTHSTKSDKLLSALSKGCCPELR---LLEINTKLDGGYSQLPIC--IQGLQ-IGCPKLQTFRLMN 370

  Fly   261 LTVHCLRLRTLLIRRC--PRVTELSLA 285
            :|.....:|.:....|  |.:.||.:|
Zfish   371 VTAVPKMIRNIPSSTCGFPMLEELCIA 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jetNP_608880.2 F-box_FBXL15 41..84 CDD:438898 10/52 (19%)
leucine-rich repeat 85..110 CDD:275381 5/24 (21%)
AMN1 96..>261 CDD:187754 37/178 (21%)
leucine-rich repeat 111..137 CDD:275381 7/25 (28%)
leucine-rich repeat 138..163 CDD:275381 5/24 (21%)
leucine-rich repeat 164..189 CDD:275381 3/24 (13%)
leucine-rich repeat 190..215 CDD:275381 5/24 (21%)
leucine-rich repeat 216..241 CDD:275381 9/34 (26%)
leucine-rich repeat 242..267 CDD:275381 4/24 (17%)
leucine-rich repeat 268..290 CDD:275381 6/20 (30%)
fbxl6NP_001296447.1 F-box_FBXL6 145..191 CDD:438891 2/7 (29%)
AMN1 213..396 CDD:187754 53/249 (21%)
leucine-rich repeat 229..254 CDD:275381 9/43 (21%)
leucine-rich repeat 255..280 CDD:275381 8/41 (20%)
leucine-rich repeat 281..306 CDD:275381 10/49 (20%)
leucine-rich repeat 307..334 CDD:275381 7/26 (27%)
leucine-rich repeat 335..362 CDD:275381 8/29 (28%)
AMN1 <391..>542 CDD:187754 3/7 (43%)
leucine-rich repeat 391..418 CDD:275381 3/7 (43%)
leucine-rich repeat 419..438 CDD:275381
leucine-rich repeat 445..473 CDD:275381
leucine-rich repeat 475..505 CDD:275381
leucine-rich repeat 506..530 CDD:275381
Blue background indicates that the domain is not in the aligned region.

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