DRSC/TRiP Functional Genomics Resources

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Protein Alignment jet and Kdm2b

DIOPT Version :9

Sequence 1:NP_608880.2 Gene:jet / 33705 FlyBaseID:FBgn0031652 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_011246510.1 Gene:Kdm2b / 30841 MGIID:1354737 Length:1312 Species:Mus musculus


Alignment Length:215 Identity:53/215 - (24%)
Similarity:76/215 - (35%) Gaps:70/215 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 RWLTDELLLPLLANNKKRLWA-VNLNECVNITALSL------QPIIVECK--------------- 162
            ||..|           ||||. ::||.|.:||.|.|      ||:.::..               
Mouse  1070 RWCCD-----------KRLWTRIDLNRCKSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINR 1123

  Fly   163 --ELRVLKLSKCQWLTTGAVDALTLHQSKLVE-FDISYC--------------------GAIGER 204
              .||.|.||.|.|:   ||.||......|:. .|:.:.                    |.:..|
Mouse  1124 LPGLRDLVLSGCSWI---AVSALCSSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNR 1185

  Fly   205 CLIIFFRKLNKLTVLSLANTPSVTDQVLIQIGNYCRELEHINVIGCAAISDYGVHALTVHCLRLR 269
                  .||..:..|.||.. .:||..|..|..:...|..:.:..|..|:|..::.||......|
Mouse  1186 ------SKLRNIVELRLAGL-DITDVSLRLIIRHMPLLSKLQLSYCNHINDQSINLLTAVGTTTR 1243

  Fly   270 TLL----IRRCPRVTELSLA 285
            ..|    :..|.:||:|.|:
Mouse  1244 DSLTEVNLSDCNKVTDLCLS 1263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jetNP_608880.2 leucine-rich repeat 85..110 CDD:275381
AMN1 96..>261 CDD:187754 44/185 (24%)
leucine-rich repeat 111..137 CDD:275381 3/16 (19%)
leucine-rich repeat 138..163 CDD:275381 11/48 (23%)
leucine-rich repeat 164..189 CDD:275381 11/24 (46%)
leucine-rich repeat 190..215 CDD:275381 6/45 (13%)
leucine-rich repeat 216..241 CDD:275381 7/24 (29%)
leucine-rich repeat 242..267 CDD:275381 6/24 (25%)
leucine-rich repeat 268..290 CDD:275381 7/22 (32%)
Kdm2bXP_011246510.1 JmjC 151..226 CDD:214721
cupin_like 198..297 CDD:389752
JHD 303..>338 CDD:375347
zf-CXXC <588..624 CDD:366873
PHD_KDM2B 634..695 CDD:277114
PTZ00449 <693..995 CDD:185628
F-box-like 1044..1082 CDD:372399 7/22 (32%)
leucine-rich repeat 1053..1075 CDD:275381 3/15 (20%)
leucine-rich repeat 1078..1102 CDD:275381 8/23 (35%)
AMN1 1083..1283 CDD:187754 46/191 (24%)
leucine-rich repeat 1103..1126 CDD:275381 0/22 (0%)
leucine-rich repeat 1127..1150 CDD:275381 11/25 (44%)
leucine-rich repeat 1151..1190 CDD:275381 5/44 (11%)
leucine-rich repeat 1191..1215 CDD:275381 7/24 (29%)
leucine-rich repeat 1216..1245 CDD:275381 7/28 (25%)
leucine-rich repeat 1246..1270 CDD:275381 6/18 (33%)
leucine-rich repeat 1271..1295 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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