DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jet and FBXL22

DIOPT Version :9

Sequence 1:NP_608880.2 Gene:jet / 33705 FlyBaseID:FBgn0031652 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_011519770.1 Gene:FBXL22 / 283807 HGNCID:27537 Length:260 Species:Homo sapiens


Alignment Length:110 Identity:30/110 - (27%)
Similarity:43/110 - (39%) Gaps:9/110 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 LVEFDISYCGAIGERCLIIFFRKLNKLTVLSLANTPSVTDQVLIQIGNYCRELEHINVIGCAAIS 254
            |....:|.||.:.:.||....|...:|..|.|.|...||::.|..:....|.|:.::|..|..:|
Human   151 LASVTLSGCGHVTDDCLARLLRCCPRLRALRLENCARVTNRTLAAVAADGRALQTLHVDFCRNVS 215

  Fly   255 DYGVHALTVHCLRLRTLLIRRC---------PRVTELSLAPLRQR 290
            ..|:..|...|.||........         ||....:|..|.||
Human   216 AAGLRRLRAACPRLALRAEHSAAMLPDQPPRPRAPAAALGKLLQR 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jetNP_608880.2 leucine-rich repeat 85..110 CDD:275381
AMN1 96..>261 CDD:187754 20/70 (29%)
leucine-rich repeat 111..137 CDD:275381
leucine-rich repeat 138..163 CDD:275381
leucine-rich repeat 164..189 CDD:275381
leucine-rich repeat 190..215 CDD:275381 7/24 (29%)
leucine-rich repeat 216..241 CDD:275381 7/24 (29%)
leucine-rich repeat 242..267 CDD:275381 7/24 (29%)
leucine-rich repeat 268..290 CDD:275381 5/30 (17%)
FBXL22XP_011519770.1 AMN1 <148..229 CDD:187754 22/77 (29%)
leucine-rich repeat 151..176 CDD:275381 7/24 (29%)
leucine-rich repeat 177..202 CDD:275381 7/24 (29%)
leucine-rich repeat 203..228 CDD:275381 7/24 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.