DRSC/TRiP Functional Genomics Resources

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Protein Alignment jet and Fbxl16

DIOPT Version :9

Sequence 1:NP_608880.2 Gene:jet / 33705 FlyBaseID:FBgn0031652 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001366323.1 Gene:Fbxl16 / 214931 MGIID:2448488 Length:575 Species:Mus musculus


Alignment Length:245 Identity:61/245 - (24%)
Similarity:92/245 - (37%) Gaps:41/245 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 VEAALEKRQ---ELHLSGNN--------------------TKNIDVAFRVLARCCQ--------R 110
            :|..||:.|   .|.|||.|                    :..|:||...:|...|        .
Mouse   306 LEVMLEQMQGVVRLELSGCNDFTEAGLWSSLSARITSLSVSDCINVADDAIAAISQLLPNLAELS 370

  Fly   111 LEVLHLACCRWLTDELLLPLLANNKKRLWAVNLNECVNITALSLQPIIVECKELRVLKLSKCQWL 175
            |:..|      :||..|....|........:.|..|..||...:..::.....|..|.||.|..:
Mouse   371 LQAYH------VTDTALAYFTARQGHSTHTLRLLSCWEITNHGVVNVVHSLPNLTSLSLSGCSKV 429

  Fly   176 TTGAVDALTLHQSKLVEFDISYCGAIGERCLIIFFRKLNKLTVLSLANTPSVTDQVLIQIGNYCR 240
            |...|:.:..:..||...|:|:|..|.:..|......|::|..|.|.....:||..|..:.. ..
Mouse   430 TDDGVELVAENLRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTGLSYLST-MS 493

  Fly   241 ELEHINVIGCAAISDYGV-HALTVHCLRLRTLLIRRCPRVTELSLAPLRQ 289
            .|..:.:..|..:.|:|: |.|.:..|||  |.:..||.:|...|:.|.|
Mouse   494 SLRSLYLRWCCQVQDFGLKHLLAMRNLRL--LSLAGCPLLTTTGLSGLVQ 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jetNP_608880.2 leucine-rich repeat 85..110 CDD:275381 11/55 (20%)
AMN1 96..>261 CDD:187754 41/173 (24%)
leucine-rich repeat 111..137 CDD:275381 6/25 (24%)
leucine-rich repeat 138..163 CDD:275381 4/24 (17%)
leucine-rich repeat 164..189 CDD:275381 7/24 (29%)
leucine-rich repeat 190..215 CDD:275381 7/24 (29%)
leucine-rich repeat 216..241 CDD:275381 6/24 (25%)
leucine-rich repeat 242..267 CDD:275381 6/25 (24%)
leucine-rich repeat 268..290 CDD:275381 8/22 (36%)
Fbxl16NP_001366323.1 PHA03247 <31..193 CDD:223021
AMN1 297..509 CDD:187754 47/209 (22%)
leucine-rich repeat 316..339 CDD:275381 5/22 (23%)
leucine-rich repeat 340..365 CDD:275381 5/24 (21%)
leucine-rich repeat 366..391 CDD:275381 6/30 (20%)
leucine-rich repeat 392..417 CDD:275381 4/24 (17%)
leucine-rich repeat 418..443 CDD:275381 7/24 (29%)
leucine-rich repeat 444..469 CDD:275381 7/24 (29%)
leucine-rich repeat 470..494 CDD:275381 6/24 (25%)
leucine-rich repeat 495..514 CDD:275381 4/18 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13318
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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