DRSC/TRiP Functional Genomics Resources

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Protein Alignment jet and si:ch73-173p19.1

DIOPT Version :9

Sequence 1:NP_608880.2 Gene:jet / 33705 FlyBaseID:FBgn0031652 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_002660968.3 Gene:si:ch73-173p19.1 / 100332407 ZFINID:ZDB-GENE-130530-952 Length:918 Species:Danio rerio


Alignment Length:434 Identity:90/434 - (20%)
Similarity:150/434 - (34%) Gaps:162/434 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LMAMASGGQPTRTASPRPLVTASIAAPRSLFDVCWDDVLIPQVAVYLSLKDLFNLRCC-SRTAQR 75
            |.:||:....:...:|....::|:|.            |.|::|..| |..:...|.. .||.:.
Zfish   463 LCSMATRATVSLMTAPSMQYSSSLAC------------LTPELAELL-LSHMARERLLRPRTLEL 514

  Fly    76 FVEAALEK---------RQEL-----------HLSGNNTKNI-DVAFRVLARCCQRLEVLHLACC 119
            |....|:|         ..||           |||..|:..| |....||:. ..:|:.|:|:.|
Zfish   515 FFGCPLQKFVLNCYPYTTNELLRQLRAFTCLKHLSFLNSPLITDAGLSVLSN-LSKLQHLNLSSC 578

  Fly   120 RWLTDEL------------------------LLPLLANNKKRLWAVNLNECVNITALSLQPIIVE 160
            ..|||..                        ||..|.:....|..::||:.. ||..:|:.:...
Zfish   579 SKLTDSCLQHITGLRSLTFLALDQTKVSDAGLLLYLQSGSSALCQLSLNQTA-ITESTLRVLPAS 642

  Fly   161 CKELRVLKLSKCQWLTTGAVDAL----TLH----------------------------------- 186
            ..:||:|.:...:.....|:..|    |||                                   
Zfish   643 VPQLRMLSIKHTKVSDVSALAELKNLQTLHLDGTGVQENSLQCLASHPSLSALSLAGIPVADGNH 707

  Fly   187 -------------------------------QSKLVEFDISYCGAIGERCLIIFFRKLNKLTVLS 220
                                           |:.|:|.|::....:.:.. |.....:.:|..||
Zfish   708 TLEIIAGLRLTQLTLPGRHSVTDSGLSFLSRQTLLLELDLTDYTQLTDHG-ITQLSSMTRLKKLS 771

  Fly   221 LANTPSVTD---QVLIQIGNYCRELEHINVIGCAAISDYGVHALTVHCLRLRTL----------L 272
            |:|| .|:|   |.||::    :||:.: .:...|::..||.||..|...|:.:          :
Zfish   772 LSNT-QVSDSGLQGLIRL----KELQEL-CLDRTAVTSRGVAALITHLPHLQVMGLASTQVGDTV 830

  Fly   273 IRR----CPRVTELSLAPLR---QRRLYIDRPQPDVGLNAYNLN 309
            |||    ||::.:|:|:..|   |...::.|.|    |:..||:
Zfish   831 IRRGLVHCPQLLKLNLSRTRITDQGLKFLCRMQ----LSQVNLD 870

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jetNP_608880.2 leucine-rich repeat 85..110 CDD:275381 10/36 (28%)
AMN1 96..>261 CDD:187754 49/262 (19%)
leucine-rich repeat 111..137 CDD:275381 10/49 (20%)
leucine-rich repeat 138..163 CDD:275381 6/24 (25%)
leucine-rich repeat 164..189 CDD:275381 9/94 (10%)
leucine-rich repeat 190..215 CDD:275381 4/24 (17%)
leucine-rich repeat 216..241 CDD:275381 11/27 (41%)
leucine-rich repeat 242..267 CDD:275381 7/24 (29%)
leucine-rich repeat 268..290 CDD:275381 9/38 (24%)
si:ch73-173p19.1XP_002660968.3 UBA_like_SF 6..43 CDD:304366
Nop25 116..>169 CDD:286843
UBQ 187..260 CDD:294102
AMN1 523..701 CDD:187754 34/179 (19%)
LRR <524..710 CDD:227223 34/187 (18%)
leucine-rich repeat 545..569 CDD:275381 8/24 (33%)
leucine-rich repeat 570..594 CDD:275381 7/23 (30%)
leucine-rich repeat 595..620 CDD:275381 3/24 (13%)
leucine-rich repeat 621..645 CDD:275381 6/24 (25%)
leucine-rich repeat 646..691 CDD:275381 8/44 (18%)
leucine-rich repeat 692..766 CDD:275381 5/74 (7%)
leucine-rich repeat 717..742 CDD:275381 1/24 (4%)
AMN1 750..>888 CDD:187754 35/132 (27%)
leucine-rich repeat 767..790 CDD:275381 11/27 (41%)
leucine-rich repeat 791..815 CDD:275381 7/24 (29%)
leucine-rich repeat 816..840 CDD:275381 5/23 (22%)
leucine-rich repeat 841..863 CDD:275381 5/21 (24%)
leucine-rich repeat 864..888 CDD:275381 3/7 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588000
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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