DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaggt-I and CDC43

DIOPT Version :9

Sequence 1:NP_525100.2 Gene:betaggt-I / 33704 FlyBaseID:FBgn0015000 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_011360.1 Gene:CDC43 / 852722 SGDID:S000003123 Length:376 Species:Saccharomyces cerevisiae


Alignment Length:379 Identity:112/379 - (29%)
Similarity:159/379 - (41%) Gaps:94/379 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VLLSKHAKNLLRFLNLLPARMASHDNTRSTIVFFAVCGLDVLNSLHLVPPQLRQ-DIIDWI---Y 70
            |:..||.|...|.|.|||:....||..|..|:|:::.||.:.:    |....:. |.:.|:   |
Yeast    11 VVTKKHRKFFERHLQLLPSSHQGHDVNRMAIIFYSISGLSIFD----VNVSAKYGDHLGWMRKHY 71

  Fly    71 GGLVVPRDNEKNCGGFMGCRAM---------VPKTEDAEI-LECMRNYQWGHLAMTYTSLAVLVT 125
            ...|:.........||:|...|         :|.|..|.: :..:|:|::            ..|
Yeast    72 IKTVLDDTENTVISGFVGSLVMNIPHATTINLPNTLFALLSMIMLRDYEY------------FET 124

  Fly   126 LGDDLSRLDRKSIVDGVAAVQKPE-GSFSACID-----GS---EDDMRFVYCAATICYMLDYWGD 181
            :      ||::|:...|:..|:|: |||.:|:|     ||   .||:||.|.|..|.|:.   |.
Yeast   125 I------LDKRSLARFVSKCQRPDRGSFVSCLDYKTNCGSSVDSDDLRFCYIAVAILYIC---GC 180

  Fly   182 VNKETMFQFITRSLRYDYGFSQE-------LEGEAHGGTTFCALAALHLSGQLHRLDATTVERMK 239
            .:||...::|.......|..||:       ...|.|.|.|.|||:.|.|...|.:|.....|...
Yeast   181 RSKEDFDEYIDTEKLLGYIMSQQCYNGAFGAHNEPHSGYTSCALSTLALLSSLEKLSDKFKEDTI 245

  Fly   240 RWLIFRQMD---------------------GFQGRPNKPVDTCYSFWIGASLCILD-------GF 276
            .||:.||:.                     |||||.||..||||:||...||.:|.       ..
Yeast   246 TWLLHRQVSSHGCMKFESELNASYDQSDDGGFQGRENKFADTCYAFWCLNSLHLLTKDWKMLCQT 310

  Fly   277 EL-TDYARNREFILSTQDKLIGGFAKWPQATPDPFHTYLGLCGLA-----FTGE 324
            || |:|..:|     ||..|.|||:|..:...|.:|:.||...||     |.||
Yeast   311 ELVTNYLLDR-----TQKTLTGGFSKNDEEDADLYHSCLGSAALALIEGKFNGE 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaggt-INP_525100.2 CAL1 10..336 CDD:227362 112/379 (30%)
GGTase-I 14..321 CDD:239225 108/370 (29%)
CDC43NP_011360.1 CAL1 1..376 CDD:227362 112/379 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341372
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5029
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54575
OrthoFinder 1 1.000 - - FOG0005480
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103705
Panther 1 1.100 - - LDO PTHR11774
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R918
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.740

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